Factsheet for PGSC0003DMT400095815

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400019458
PGSC0003DMT400019462
PGSC0003DMT400020524
PGSC0003DMT400039840
PGSC0003DMT400044886
PGSC0003DMT400059315
PGSC0003DMT400070848
PGSC0003DMT400095815

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26270.1	PGSC0003DMT400020524	AT3G57870.1	21798944
AT4G26270.1	PGSC0003DMT400039840	AT3G57870.1	21798944
AT4G29220.1	PGSC0003DMT400019458	AT1G13520.1	21798944
AT4G29220.1	PGSC0003DMT400019462	AT1G13520.1	21798944
AT4G29220.1	PGSC0003DMT400059315	AT1G13520.1	21798944
AT4G29220.1	PGSC0003DMT400020524	AT3G57870.1	21798944
AT4G29220.1	PGSC0003DMT400039840	AT3G57870.1	21798944
AT4G29220.1	PGSC0003DMT400044886	AT4G29220.1	21798944
AT4G29220.1	PGSC0003DMT400070848	AT4G29220.1	21798944
AT4G29220.1	PGSC0003DMT400095815	AT4G29220.1	21798944
AT5G56630.1	PGSC0003DMT400019458	AT1G13520.1	21798944
AT5G56630.1	PGSC0003DMT400019462	AT1G13520.1	21798944
AT5G56630.1	PGSC0003DMT400059315	AT1G13520.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65216	Canola	cytosol, mitochondrion	21.15	52.38
CDY72240	Canola	cytosol	29.49	30.07
Bra033014.1-P	Field mustard	cytosol	29.49	30.07
PGSC0003DMT400070848	Potato	cytosol	89.1	29.7
Solyc04g072580.1.1	Tomato	cytosol	91.03	28.46
CDY03977	Canola	cytosol	30.13	27.17
CDY32769	Canola	cytosol	63.46	26.83
KRH55292	Soybean	extracellular	12.82	24.1
PGSC0003DMT400044886	Potato	cytosol	77.56	24.01
VIT_11s0016g02850.t01	Wine grape	cytosol	71.15	22.61
GSMUA_Achr2P16600_001	Banana	cytosol	70.51	22.45
GSMUA_Achr7P13640_001	Banana	cytosol	67.95	21.81
GSMUA_Achr1P04940_001	Banana	cytosol	66.67	21.53
CDY48604	Canola	cytosol	64.1	21.14
GSMUA_Achr4P08240_001	Banana	cytosol	63.46	21.11
KRH60181	Soybean	cytosol, nucleus	63.46	21.02
KRH41464	Soybean	cytosol	63.46	20.93
PGSC0003DMT400065447	Potato	cytosol	64.74	20.87
CDY41800	Canola	cytosol	64.74	20.82
CDY20715	Canola	cytosol	65.38	20.82
CDY11911	Canola	cytosol	63.46	20.71
CDY06829	Canola	cytosol	63.46	20.67
AT5G56630.1	Thale cress	cytosol	64.1	20.62
CDY69051	Canola	cytosol	62.82	20.55
Bra006864.1-P	Field mustard	cytosol	63.46	20.41
AT4G29220.1	Thale cress	cytosol	61.54	20.3
CDY32873	Canola	cytosol	63.46	20.29
Bra002801.1-P	Field mustard	cytosol	63.46	20.29
CDX88580	Canola	cytosol	62.18	20.0
KRG92178	Soybean	cytosol, plastid	42.31	19.88
Bra026452.1-P	Field mustard	cytosol	62.18	19.8
CDX94352	Canola	cytosol	61.54	19.63
AT4G26270.1	Thale cress	cytosol	61.54	19.63
CDX89351	Canola	cytosol	61.54	19.63
GSMUA_Achr4P01040_001	Banana	cytosol	67.95	19.56
Bra011089.1-P	Field mustard	cytosol, plastid	64.1	18.73
CDY07887	Canola	extracellular, plasma membrane	28.21	18.18
KRH49011	Soybean	endoplasmic reticulum	61.54	17.91
KRH74196	Soybean	endoplasmic reticulum	60.9	17.63
Os05t0524400-01	Rice	nucleus	62.18	17.11
TraesCS1B01G357000.1	Wheat	cytosol	61.54	16.96
TraesCS1A01G344000.1	Wheat	nucleus	61.54	16.87
TraesCS1D01G346200.1	Wheat	golgi	60.9	16.7
Zm00001d038775_P002	Maize	extracellular	60.26	16.35
GSMUA_Achr7P10770_001	Banana	cytosol	46.15	14.91
HORVU1Hr1G075550.1	Barley	plastid	60.9	14.87
TraesCS3B01G311900.2	Wheat	cytosol	59.62	14.72
PGSC0003DMT400050810	Potato	plastid	42.31	14.47
HORVU3Hr1G070300.3	Barley	cytosol, plastid	60.9	14.46
TraesCS3A01G277700.1	Wheat	cytosol	60.26	12.26
Zm00001d043563_P002	Maize	cytosol, extracellular	59.62	12.17
TraesCS3D01G278000.1	Wheat	cytosol	60.26	12.11
GSMUA_Achr4P15420_001	Banana	cytosol	27.56	11.91
OQU87495	Sorghum	cytosol	59.62	11.91
PGSC0003DMT400041788	Potato	cytosol, plastid	39.1	11.47
PGSC0003DMT400060752	Potato	cytosol, plastid	37.82	10.99
OQU78332	Sorghum	mitochondrion	60.9	8.72
CDY68743	Canola	cytosol, plastid	5.13	5.44
CDX99958	Canola	plastid	5.13	5.19
CDX93710	Canola	mitochondrion	5.13	4.88

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:3.40.50.460
MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0061615	UniProt:M1DX38	EnsemblPlantsGene:PGSC0003DMG400045386
PGSC:PGSC0003DMG400045386	EnsemblPlants:PGSC0003DMT400095815	InterPro:PKF_sf	PANTHER:PTHR13697	PANTHER:PTHR13697:SF34	SUPFAM:SSF53784
UniParc:UPI0002967636	SEG:seg	:	:	:	:

Description

Phosphofructokinase [Source:PGSC_GENE;Acc:PGSC0003DMG400045386]

Coordinates

chr4:-:61919888..61920358

Molecular Weight (calculated)

17433.7 Da

IEP (calculated)

4.770

GRAVY (calculated)

-0.362

Length

156 amino acids

Sequence
(BLAST)

001: MDTMVIVVAE GARQDDEQVD VGLWISKKIK EHFSKEKKMM INLKYIDPTY MIRAIASNAS DNVYCTHLAQ SAVHGAMAGY TGFTVGPVNN THAYIPFDRI
101: NEKQNKVDIT DMMWAQLLSS TNQPSFLSTT RSVDIIEANK DEEPPIQLSD GETNSC

Best Arabidopsis Sequence Match ( AT4G26270.1 )
(BLAST)

001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK

Arabidopsis Description

PFK3ATP-dependent 6-phosphofructokinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94AA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.