Factsheet for Bra011089.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003301.1-P
Bra007363.1-P
Bra011089.1-P
Bra014602.1-P
Bra016728.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G29220.1	Bra016728.1-P	AT1G13520.1	21798944
AT4G29220.1	Bra003301.1-P	AT3G57870.1	21798944
AT4G29220.1	Bra007363.1-P	AT3G57870.1	21798944
AT4G29220.1	Bra014602.1-P	AT3G57870.1	21798944
AT4G29220.1	Bra011089.1-P	AT4G29220.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48604	Canola	cytosol	88.58	100.0
AT4G29220.1	Thale cress	cytosol	80.34	90.7
Bra011387.1-P	Field mustard	cytosol	68.54	79.05
GSMUA_Achr4P08240_001	Banana	cytosol	69.29	78.89
Bra026452.1-P	Field mustard	cytosol	71.35	77.76
GSMUA_Achr1P04940_001	Banana	cytosol	70.04	77.43
GSMUA_Achr7P13640_001	Banana	cytosol	70.41	77.37
Bra002801.1-P	Field mustard	cytosol	70.41	77.05
VIT_11s0016g02850.t01	Wine grape	cytosol	70.79	76.99
GSMUA_Achr2P16600_001	Banana	cytosol	69.85	76.12
Solyc07g045160.2.1	Tomato	cytosol	69.48	75.71
Bra006864.1-P	Field mustard	cytosol	68.35	75.26
PGSC0003DMT400044886	Potato	cytosol	70.41	74.6
PGSC0003DMT400070848	Potato	cytosol	65.36	74.57
GSMUA_Achr4P01040_001	Banana	cytosol	71.35	70.3
GSMUA_Achr4P15420_001	Banana	cytosol	47.0	69.53
Solyc04g072580.1.1	Tomato	cytosol	64.42	68.94
PGSC0003DMT400095815	Potato	cytosol	18.73	64.1
Bra012940.1-P	Field mustard	plastid	63.11	63.35
GSMUA_Achr7P10770_001	Banana	cytosol	56.55	62.53
Os05t0524400-01	Rice	nucleus	64.98	61.2
TraesCS1B01G357000.1	Wheat	cytosol	64.23	60.6
Zm00001d038775_P002	Maize	extracellular	65.17	60.52
TraesCS1A01G344000.1	Wheat	nucleus	64.42	60.46
TraesCS1D01G346200.1	Wheat	golgi	64.42	60.46
TraesCS3B01G311900.2	Wheat	cytosol	65.17	55.06
HORVU1Hr1G075550.1	Barley	plastid	64.42	53.83
Bra024914.1-P	Field mustard	cytosol	44.19	53.15
HORVU3Hr1G070300.3	Barley	cytosol, plastid	65.36	53.12
TraesCS3A01G277700.1	Wheat	cytosol	65.36	45.5
Zm00001d043563_P002	Maize	cytosol, extracellular	64.61	45.16
TraesCS3D01G278000.1	Wheat	cytosol	65.54	45.1
OQU87495	Sorghum	cytosol	65.36	44.69
Bra033014.1-P	Field mustard	cytosol	12.55	43.79
Bra010637.1-P	Field mustard	mitochondrion, plastid	40.82	43.34
Bra030394.1-P	Field mustard	cytosol, plastid	30.52	40.45
Bra038519.1-P	Field mustard	plastid	41.2	39.5
KRG92178	Soybean	cytosol, plastid	23.41	37.65
OQU78332	Sorghum	mitochondrion	65.36	32.05

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	MapMan:2.1.1.1.1
Gene3D:3.40.50.450	InterPro:ATP_PFK	EnsemblPlantsGene:Bra011089	EnsemblPlants:Bra011089.1	EnsemblPlants:Bra011089.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0005975
GO:GO:0006002	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0046872	GO:GO:0061615	UniProt:M4D3N5	HAMAP:MF_01981	PFAM:PF00365
PIRSF:PIRSF000534	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697	PANTHER:PTHR13697:SF31	InterPro:Phosphofructokinase_dom
InterPro:PyroP-dep_PFK_TP0108	SUPFAM:SSF53784	UniParc:UPI0002545723	SEG:seg	:	:

Description

AT4G29220 (E=2e-243) PFK1 | PFK1 (PHOSPHOFRUCTOKINASE 1); 6-phosphofructokinase

Coordinates

chrA01:+:3935705..3938126

Molecular Weight (calculated)

58922.4 Da

IEP (calculated)

7.845

GRAVY (calculated)

-0.247

Length

534 amino acids

Sequence
(BLAST)

001: MDSYRFIKSS SKQSTSSETD HHHHQFGSLI PRLGRKYRSL SFDSGLLLIV NQRFESPTRL VMATSALNSD KKIVTGPAGY VLEDVPHFSD YIPNPPTYPN
101: PLQDNAAYSV VKQYFVDEDD TVPQKIVVHP DSPRGTHFRR AGPRQRVYFD SDDVVACIVT CGGLCPGLNT VIREIVCGLS YMYGVKKILG IEGGYRGFYA
201: RNTIDLDLKT VNDIHKRGGT ILGTSRGGHD TTKIVDSIQD RGINQVYIIG GDGSQKGAAV IFEEIRRRGL KVAVAGIPKT IDNDIPIIDR SFGFDTAVEE
301: AQRAINAAHV EATSFENGIG LVKLMGRYSG FIAMYATLAS RDVDCCLIPE SPFFLEGKGG LFEFIGKRLK ENGHMVIVIA EGAGQDLLAE SNEQSTTLKD
401: ASGNKLLQDV GLWISQRIKD HFAKKMTLNL KYIDPTYMIR AVPSNASDNV CCTLLAQSAV HGVMAGYNGF TVGLVNGRHT YIPFYRITEK QNKVVITDRM
501: WARLLSSTNQ PSFMKHDDIH EPNHSGGEAG AMNW

Best Arabidopsis Sequence Match ( AT4G29220.1 )
(BLAST)

001: MSSSVPNSDR KIVTGPAGYI LEDVPHFSDD FPDHPTYPNP LQDNAAYSVV KQYFVDEDDT VPQKIVVHPD SPRGTHFRRA GPRQRVYFES DDVLACIVTC
101: GGLCPGLNTV IREIVCGLSY MYGVKRILGI DGGYRGFYAR NTIHLDLKTV NDIHRSGGTI LGTSRGGHNT TKIVDSIQDR GINQVYIIGG DGSQKGAAAI
201: FEEIRKRKLK VAVAGIPKTI DNDIPIIDRS FGFDTAVEEA QRAINAAHVE ATSFENGIGL VKLMGRYSGF IAMHATLASR DVDCCLIPES PFFLEGSGGL
301: FEFIDKRLKE SGHMVIVIAE GAGQDLLSES MKESTTLKDA SGNKLLQDIG LWISQRIKDH FAKKMTLTLK YIDPTYMIRA VPSNASDNVC CTLLAQSAVH
401: GVMAGYNGFT VGLVNGRHTY IPFNRITEKQ NKVVITDRMW ARLLSSTNQP SFMKQADKIH SNQLVGEPGT MKW

Arabidopsis Description

PFK1ATP-dependent 6-phosphofructokinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0F9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.