Factsheet for Os05t0524400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

nucleus: 19621931
nucleus: 26035336
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0123100-01
Os05t0524400-01
Os08t0412700-01
Os08t0412800-01
Os08t0413100-00
Os08t0413200-00
Os08t0413500-00
Os10t0536000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26270.1	Os03t0123100-01	AT3G57870.1	21798944
AT4G26270.1	Os10t0536000-01	AT3G57870.1	21798944
AT4G29220.1	Os08t0412700-01	AT1G13520.1	21798944
AT4G29220.1	Os08t0412800-01	AT1G13520.1	21798944
AT4G29220.1	Os08t0413100-00	AT1G13520.1	21798944
AT4G29220.1	Os08t0413200-00	AT1G13520.1	21798944
AT4G29220.1	Os08t0413500-00	AT1G13520.1	21798944
AT4G29220.1	Os03t0123100-01	AT3G57870.1	21798944
AT4G29220.1	Os10t0536000-01	AT3G57870.1	21798944
AT4G29220.1	Os05t0524400-01	AT4G29220.1	21798944
AT5G56630.1	Os08t0412700-01	AT1G13520.1	21798944
AT5G56630.1	Os08t0412800-01	AT1G13520.1	21798944
AT5G56630.1	Os08t0413100-00	AT1G13520.1	21798944
AT5G56630.1	Os08t0413200-00	AT1G13520.1	21798944
AT5G56630.1	Os08t0413500-00	AT1G13520.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038775_P002	Maize	extracellular	89.95	88.7
TraesCS1B01G357000.1	Wheat	cytosol	88.54	88.69
TraesCS1A01G344000.1	Wheat	nucleus	88.01	87.7
TraesCS1D01G346200.1	Wheat	golgi	87.3	86.99
HORVU1Hr1G075550.1	Barley	plastid	88.01	78.09
GSMUA_Achr4P08240_001	Banana	cytosol	62.96	76.12
GSMUA_Achr1P04940_001	Banana	cytosol	64.02	75.16
Bra011387.1-P	Field mustard	cytosol	60.14	73.65
CDX75291	Canola	cytosol	60.14	73.65
CDX68896	Canola	cytosol	60.14	73.65
VIT_04s0008g00520.t01	Wine grape	cytosol	62.43	72.54
KRH60181	Soybean	cytosol, nucleus	59.96	72.19
CDY48604	Canola	cytosol	60.14	72.09
AT4G32840.1	Thale cress	cytosol	58.55	71.86
CDY69051	Canola	cytosol	60.32	71.7
VIT_11s0016g02850.t01	Wine grape	cytosol	62.08	71.69
KRH41464	Soybean	cytosol	59.61	71.46
KRH44258	Soybean	cytosol	57.67	71.4
Solyc12g095880.1.1	Tomato	cytosol	61.02	71.34
AT4G29220.1	Thale cress	cytosol	59.44	71.25
AT5G56630.1	Thale cress	cytosol	60.85	71.13
KRH47193	Soybean	cytosol	58.2	71.12
CDY06829	Canola	cytosol	59.96	70.98
CDY41800	Canola	cytosol	60.49	70.72
Bra002801.1-P	Field mustard	cytosol	60.85	70.7
CDY32873	Canola	cytosol	60.85	70.7
CDY20715	Canola	cytosol	61.02	70.61
AT4G26270.1	Thale cress	cytosol	60.85	70.55
CDY11911	Canola	cytosol	59.44	70.5
CDY32769	Canola	cytosol	45.86	70.46
Bra026452.1-P	Field mustard	cytosol	60.85	70.41
Solyc07g045160.2.1	Tomato	cytosol	60.67	70.2
CDX94352	Canola	cytosol	60.49	70.14
CDX89351	Canola	cytosol	60.49	70.14
Bra006864.1-P	Field mustard	cytosol	59.79	69.9
CDX88580	Canola	cytosol	59.44	69.48
PGSC0003DMT400065447	Potato	cytosol	59.26	69.42
KRH62114	Soybean	endoplasmic reticulum	62.08	69.16
PGSC0003DMT400070848	Potato	cytosol	56.79	68.8
PGSC0003DMT400044886	Potato	cytosol	60.85	68.45
Os05t0194900-01	Rice	cytosol	34.74	68.4
KRH23377	Soybean	cytosol	58.02	68.4
Os01t0191700-01	Rice	plasma membrane	63.67	67.98
Solyc08g066100.2.1	Tomato	cytosol	59.44	67.4
GSMUA_Achr4P01040_001	Banana	cytosol	64.02	66.97
KRH74196	Soybean	endoplasmic reticulum	62.08	65.31
KRH49011	Soybean	endoplasmic reticulum	61.73	65.3
Bra011089.1-P	Field mustard	cytosol, plastid	61.2	64.98
KRH52812	Soybean	endoplasmic reticulum	62.43	64.95
CDY02131	Canola	plastid	60.85	64.85
CDY23054	Canola	plastid	60.67	64.66
Solyc04g072580.1.1	Tomato	cytosol	56.61	64.33
Bra012940.1-P	Field mustard	plastid	60.32	64.29
GSMUA_Achr4P15420_001	Banana	cytosol	40.92	64.27
Os06t0151900-01	Rice	cytosol, plasma membrane	17.46	63.46
AT5G61580.1	Thale cress	plastid	59.26	63.4
VIT_16s0013g01140.t01	Wine grape	plastid	59.26	63.04
KRH34610	Soybean	plastid	57.85	62.84
KRH09958	Soybean	nucleus	57.5	62.45
PGSC0003DMT400095815	Potato	cytosol	17.11	62.18
Solyc03g093520.2.1	Tomato	plastid	56.79	59.74
Os09t0479800-01	Rice	cytosol, plasma membrane	40.39	49.25
CDY65216	Canola	cytosol, mitochondrion	5.47	49.21
OQU78332	Sorghum	mitochondrion	89.59	46.65
Os04t0469500-01	Rice	plasma membrane	39.68	46.2
KRH55292	Soybean	extracellular	6.35	43.37
Os09t0415800-01	Rice	plastid	38.98	41.94
Os10t0405600-01	Rice	plastid	37.92	41.03
CDY68743	Canola	cytosol, plastid	10.23	39.46
KRG92178	Soybean	cytosol, plastid	22.93	39.16
Bra033014.1-P	Field mustard	cytosol	10.23	37.91
CDY72240	Canola	cytosol	10.23	37.91
CDY03977	Canola	cytosol	11.11	36.42
CDX93710	Canola	mitochondrion	10.23	35.37
CDX99958	Canola	plastid	9.52	35.06
CDY07887	Canola	extracellular, plasma membrane	12.52	29.34
Os08t0439000-01	Rice	cytosol	10.58	21.74

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	MapMan:2.1.1.1.1
Gene3D:3.40.50.450	EntrezGene:4339369	ProteinID:AAU44054.1	ProteinID:AAV44044.1	EMBL:AK072857	InterPro:ATP_PFK
ProteinID:BAF18004.1	ProteinID:BAS94969.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0006002	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0046872	GO:GO:0061615	HAMAP:MF_01981	EnsemblPlantsGene:Os05g0524400	EnsemblPlants:Os05t0524400-01
PFAM:PF00365	PIRSF:PIRSF000534	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697	PANTHER:PTHR13697:SF28
InterPro:Phosphofructokinase_dom	InterPro:PyroP-dep_PFK_TP0108	UniProt:Q65X97	SUPFAM:SSF53784	UniParc:UPI000043F46C	RefSeq:XP_015639708.1
SEG:seg	:	:	:	:	:

Description

phosphofructokinase 5Phosphofructokinase family protein. (Os05t0524400-01);Phosphofructokinase family protein. (Os05t0524400-02)

Coordinates

chr5:+:26107195..26112398

Molecular Weight (calculated)

62557.1 Da

IEP (calculated)

6.895

GRAVY (calculated)

-0.398

Length

567 amino acids

Sequence
(BLAST)

001: MASSHIILPP DDDDEEQRRL EEEEDEDPWA RSGPPPAAPE HAMKAALPFS ATCVRISRDS YPNLRALRNA SSVSLADAAY VKISEGDFGY VLDDVPHLVD
101: HLPDAPTYPN PLQDHPAYST VKQYFVNEDD TVPQKVVVQK NSRRGVHFRR AGPRQKVYFE SDEVKACIVT CGGLCPGLNT VIRELVCGLA HMYNVSKIYG
201: IQNGYKGFYS SNYLTLTPKS VDDIHKRGGT VLGTSRGGHD TKKIVDNIQD RGINQVYIIG GDGTQKGAYE IFKEIRKRGL KVSVAGIPKT IDNDIAIIDK
301: SFGFDTAVEE AQRAIDSAHV EACSAENGIG LVKLMGRYSG FIAMYATLAS RDVDCCLIPE SPFYMDGEGG LLQYVERRLK ENKHMVIVVA EGAGQDLIAK
401: SLSTSEQQDA SGNKLLLDIG LWLTHKIKDH FKSKKMEMTI KYIDPTYMIR AIPSNASDNV YCTLLAHSAI HGAMAGYSFT VGNVNGRHAY IPFYRVTSTR
501: NKVKITDRMW ARLLSSTNQP SFLSQKDIDE AKENDRTANK PPLPTGLSHH VANSFDQSAS SSSNSQI

Best Arabidopsis Sequence Match ( AT4G26270.1 )
(BLAST)

001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK

Arabidopsis Description

PFK3ATP-dependent 6-phosphofructokinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94AA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.