Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G56630.1 | CDY21099 | AT1G13520.1 | 21798944 |
| AT5G56630.1 | CDY21100 | AT1G13520.1 | 21798944 |
| AT5G56630.1 | CDY50165 | AT1G13520.1 | 21798944 |
| AT5G56630.1 | CDY50167 | AT1G13520.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68743 | Canola | cytosol, plastid | 86.36 | 90.48 |
| CDX93710 | Canola | mitochondrion | 87.66 | 82.32 |
| CDY32769 | Canola | cytosol | 35.06 | 14.63 |
| CDY32873 | Canola | cytosol | 40.91 | 12.91 |
| GSMUA_Achr4P15420_001 | Banana | cytosol | 29.22 | 12.47 |
| CDY41800 | Canola | cytosol | 38.96 | 12.37 |
| CDY20715 | Canola | cytosol | 38.96 | 12.24 |
| AT5G56630.1 | Thale cress | cytosol | 38.31 | 12.16 |
| GSMUA_Achr7P13640_001 | Banana | cytosol | 38.31 | 12.14 |
| CDY11911 | Canola | cytosol | 37.01 | 11.92 |
| CDY48604 | Canola | cytosol | 36.36 | 11.84 |
| CDX88580 | Canola | cytosol | 37.01 | 11.75 |
| CDY06829 | Canola | cytosol | 36.36 | 11.69 |
| CDX68896 | Canola | cytosol | 35.06 | 11.66 |
| CDX75291 | Canola | cytosol | 35.06 | 11.66 |
| GSMUA_Achr2P16600_001 | Banana | cytosol | 37.01 | 11.63 |
| CDY03977 | Canola | cytosol | 12.99 | 11.56 |
| PGSC0003DMT400070848 | Potato | cytosol | 34.42 | 11.32 |
| GSMUA_Achr4P08240_001 | Banana | cytosol | 34.42 | 11.3 |
| CDY69051 | Canola | cytosol | 34.42 | 11.11 |
| CDX94352 | Canola | cytosol | 35.06 | 11.04 |
| CDX89351 | Canola | cytosol | 35.06 | 11.04 |
| CDX77799 | Canola | cytosol | 31.82 | 11.04 |
| CDY17703 | Canola | cytosol | 31.82 | 11.04 |
| Solyc07g045160.2.1 | Tomato | cytosol | 35.06 | 11.02 |
| GSMUA_Achr1P04940_001 | Banana | cytosol | 34.42 | 10.97 |
| PGSC0003DMT400044886 | Potato | cytosol | 35.71 | 10.91 |
| VIT_11s0016g02850.t01 | Wine grape | cytosol | 34.42 | 10.79 |
| GSMUA_Achr4P01040_001 | Banana | cytosol | 37.66 | 10.7 |
| Solyc04g072580.1.1 | Tomato | cytosol | 33.12 | 10.22 |
| CDY02131 | Canola | plastid | 33.12 | 9.59 |
| CDY23054 | Canola | plastid | 33.12 | 9.59 |
| Os05t0524400-01 | Rice | nucleus | 35.06 | 9.52 |
| Zm00001d038775_P002 | Maize | extracellular | 35.06 | 9.39 |
| TraesCS1B01G357000.1 | Wheat | cytosol | 33.12 | 9.01 |
| TraesCS1A01G344000.1 | Wheat | nucleus | 33.12 | 8.96 |
| TraesCS1D01G346200.1 | Wheat | golgi | 33.12 | 8.96 |
| TraesCS3B01G311900.2 | Wheat | cytosol | 35.71 | 8.7 |
| CDX90382 | Canola | plastid | 28.57 | 8.59 |
| CDY52512 | Canola | mitochondrion | 27.92 | 8.55 |
| CDY13756 | Canola | plastid | 29.87 | 8.53 |
| CDX76918 | Canola | plastid | 29.87 | 8.53 |
| HORVU3Hr1G070300.3 | Barley | cytosol, plastid | 36.36 | 8.52 |
| GSMUA_Achr7P10770_001 | Banana | cytosol | 25.32 | 8.07 |
| HORVU1Hr1G075550.1 | Barley | plastid | 33.12 | 7.98 |
| KRG92178 | Soybean | cytosol, plastid | 16.23 | 7.53 |
| TraesCS3A01G277700.1 | Wheat | cytosol | 35.71 | 7.17 |
| TraesCS3D01G278000.1 | Wheat | cytosol | 35.71 | 7.09 |
| Zm00001d043563_P002 | Maize | cytosol, extracellular | 33.77 | 6.81 |
| OQU87495 | Sorghum | cytosol | 33.77 | 6.66 |
| CDY07887 | Canola | extracellular, plasma membrane | 8.44 | 5.37 |
| PGSC0003DMT400095815 | Potato | cytosol | 5.19 | 5.13 |
| OQU78332 | Sorghum | mitochondrion | 35.71 | 5.05 |
| CDY72240 | Canola | cytosol | 3.9 | 3.92 |
| CDY65216 | Canola | cytosol, mitochondrion | 1.3 | 3.17 |
Protein Annotations
| EnsemblPlants:CDX99958 | EnsemblPlantsGene:GSBRNA2T00108829001 | PANTHER:PTHR13697 | PANTHER:PTHR13697:SF31 | ProteinID:CDX99958 | ProteinID:CDX99958.1 |
| UniParc:UPI0004EE1B0B | MapMan:35.1 | : | : | : | : |
Description
BnaC09g27470D
Coordinates
chrLK031915:+:1131945..1134462
Molecular Weight (calculated)
17945.7 Da
IEP (calculated)
8.994
GRAVY (calculated)
-0.364
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MRHLWSSFIG DPSSINTYSS ILRRHGQSHN CELLQILLCP TDLPSISRWR MVNREWFGQD EVKNIVCSIY RFYYRGKYKK NTIDTSHVEA ASNENGIGFV
101: KLMDVTVHFF SNGKCGLLEF IEKRIKVNGH KVIVLAEEAE RELMCKSMES NRRL
101: KLMDVTVHFF SNGKCGLLEF IEKRIKVNGH KVIVLAEEAE RELMCKSMES NRRL
001: MSSPRSNKPK IVNGPGGYIL QDVPHLIDYL PDLPTYPNPL QDNPAYSVVK QYFVHADDSV PEKVVVHKDG PRGVHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REVVSSLSYM YGVKRILGID GGYRGFYAKN TIPLNSKVVN DIHKRGGTII GTSRGGHDTN KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRRLKV AVVGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESNENGIGFV KLMGRYSGYI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EFIERRLKDH GHMVIVLAEG AGQDLMCKSM ESTPMDASGN KLLKDVGLWL SQSIKDHFKK NKMVMNLKYI DPTYMIRAVP SNASDNVYCT LLAQSAVHGA
401: MAGYTGYTSG LVNGRQTYIP FYRITETQNN VVITDRMWAR LLSSTNQPSF LGPKDTSEEK KELPETPLLD DGAVDIPPVT KEVTK
101: GLCPGLNTVI REVVSSLSYM YGVKRILGID GGYRGFYAKN TIPLNSKVVN DIHKRGGTII GTSRGGHDTN KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRRLKV AVVGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESNENGIGFV KLMGRYSGYI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EFIERRLKDH GHMVIVLAEG AGQDLMCKSM ESTPMDASGN KLLKDVGLWL SQSIKDHFKK NKMVMNLKYI DPTYMIRAVP SNASDNVYCT LLAQSAVHGA
401: MAGYTGYTSG LVNGRQTYIP FYRITETQNN VVITDRMWAR LLSSTNQPSF LGPKDTSEEK KELPETPLLD DGAVDIPPVT KEVTK
Arabidopsis Description
PFK7ATP-dependent 6-phosphofructokinase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5J7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.