CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY21099
CDY21100
CDY50165
CDY50167

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56630.1	CDY21099	AT1G13520.1	21798944
AT5G56630.1	CDY21100	AT1G13520.1	21798944
AT5G56630.1	CDY50165	AT1G13520.1	21798944
AT5G56630.1	CDY50167	AT1G13520.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033014.1-P	Field mustard	cytosol	100.0	100.0
CDY65216	Canola	cytosol, mitochondrion	22.22	53.97
CDY03977	Canola	cytosol	52.94	46.82
PGSC0003DMT400095815	Potato	cytosol	30.07	29.49
CDY07887	Canola	extracellular, plasma membrane	35.95	22.73
CDY32769	Canola	cytosol	47.71	19.78
CDY32873	Canola	cytosol	48.37	15.16
AT5G56630.1	Thale cress	cytosol	47.06	14.85
CDY41800	Canola	cytosol	47.06	14.85
CDY20715	Canola	cytosol	47.06	14.69
CDY69051	Canola	cytosol	45.75	14.68
CDX75291	Canola	cytosol	43.79	14.47
CDX68896	Canola	cytosol	43.79	14.47
CDY11911	Canola	cytosol	45.1	14.44
CDX94352	Canola	cytosol	45.75	14.31
CDX89351	Canola	cytosol	45.75	14.31
CDX88580	Canola	cytosol	45.1	14.23
CDY48604	Canola	cytosol	43.14	13.95
CDY06829	Canola	cytosol	43.14	13.78
GSMUA_Achr4P08240_001	Banana	cytosol	41.18	13.43
GSMUA_Achr1P04940_001	Banana	cytosol	41.83	13.25
GSMUA_Achr2P16600_001	Banana	cytosol	41.83	13.06
GSMUA_Achr7P13640_001	Banana	cytosol	40.52	12.76
GSMUA_Achr4P01040_001	Banana	cytosol	44.44	12.55
Solyc07g045160.2.1	Tomato	cytosol	39.87	12.45
VIT_11s0016g02850.t01	Wine grape	cytosol	39.87	12.42
PGSC0003DMT400044886	Potato	cytosol	40.52	12.3
PGSC0003DMT400070848	Potato	cytosol	35.95	11.75
KRG92178	Soybean	cytosol, plastid	25.49	11.75
CDX77799	Canola	cytosol	33.99	11.71
CDY17703	Canola	cytosol	33.99	11.71
CDY02131	Canola	plastid	39.22	11.28
CDY23054	Canola	plastid	38.56	11.09
Solyc04g072580.1.1	Tomato	cytosol	35.29	10.82
GSMUA_Achr4P15420_001	Banana	cytosol	24.18	10.25
TraesCS1B01G357000.1	Wheat	cytosol	37.91	10.25
Os05t0524400-01	Rice	nucleus	37.91	10.23
TraesCS1D01G346200.1	Wheat	golgi	37.91	10.19
TraesCS1A01G344000.1	Wheat	nucleus	37.91	10.19
GSMUA_Achr7P10770_001	Banana	cytosol	32.03	10.14
Zm00001d038775_P002	Maize	extracellular	37.25	9.91
TraesCS3B01G311900.2	Wheat	cytosol	37.91	9.18
CDY52512	Canola	mitochondrion	30.07	9.15
HORVU1Hr1G075550.1	Barley	plastid	37.91	9.08
CDX90382	Canola	plastid	30.07	8.98
HORVU3Hr1G070300.3	Barley	cytosol, plastid	37.91	8.83
CDX76918	Canola	plastid	30.72	8.72
CDY13756	Canola	plastid	30.72	8.72
Zm00001d043563_P002	Maize	cytosol, extracellular	38.56	7.72
TraesCS3A01G277700.1	Wheat	cytosol	38.56	7.69
TraesCS3D01G278000.1	Wheat	cytosol	38.56	7.6
OQU87495	Sorghum	cytosol	38.56	7.55
OQU78332	Sorghum	mitochondrion	37.91	5.33
CDX99958	Canola	plastid	3.92	3.9
CDY68743	Canola	cytosol, plastid	3.27	3.4
CDX93710	Canola	mitochondrion	3.27	3.05

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:3.40.50.460
MapMan:35.1	GO:A0A078K0Q3	UniProt:A0A078K0Q3	EnsemblPlants:CDY72240	ProteinID:CDY72240	ProteinID:CDY72240.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0061615	EnsemblPlantsGene:GSBRNA2T00025957001	InterPro:PKF_sf	PANTHER:PTHR13697
PANTHER:PTHR13697:SF31	MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-7385	SUPFAM:SSF53784
UniPathway:UPA00109	UniParc:UPI00025455D9	:	:	:	:

Description

BnaAnng40390DBnaAnng40390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K0Q3]

Coordinates

chrLK049716:-:214..1552

Molecular Weight (calculated)

17856.7 Da

IEP (calculated)

9.764

GRAVY (calculated)

-0.346

Length

153 amino acids

Sequence
(BLAST)

001: MKPFLEHYNN NRFVEEDHRA STHHMLKQRV MRMVSGMLSL WVVTVTRVDV QKHDFNADAS DYKLLKDVGF WLPQSIKKLN MVKNLKYIDP TYMIRVVQPM
101: HQTMFTDTLL AWSVVHGAIA GYTEYTSDLI NGRPTNIPYN RITEKQNNVV ITG

Best Arabidopsis Sequence Match ( AT5G56630.1 )
(BLAST)

001: MSSPRSNKPK IVNGPGGYIL QDVPHLIDYL PDLPTYPNPL QDNPAYSVVK QYFVHADDSV PEKVVVHKDG PRGVHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REVVSSLSYM YGVKRILGID GGYRGFYAKN TIPLNSKVVN DIHKRGGTII GTSRGGHDTN KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRRLKV AVVGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESNENGIGFV KLMGRYSGYI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EFIERRLKDH GHMVIVLAEG AGQDLMCKSM ESTPMDASGN KLLKDVGLWL SQSIKDHFKK NKMVMNLKYI DPTYMIRAVP SNASDNVYCT LLAQSAVHGA
401: MAGYTGYTSG LVNGRQTYIP FYRITETQNN VVITDRMWAR LLSSTNQPSF LGPKDTSEEK KELPETPLLD DGAVDIPPVT KEVTK

Arabidopsis Description

PFK7ATP-dependent 6-phosphofructokinase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5J7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.