Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
26228564
|
msms PMID:
26228564
doi
Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G357000.1 | Wheat | cytosol | 98.07 | 98.59 |
| TraesCS1D01G346200.1 | Wheat | golgi | 98.42 | 98.42 |
| Os05t0524400-01 | Rice | nucleus | 87.7 | 88.01 |
| Zm00001d038775_P002 | Maize | extracellular | 86.82 | 85.91 |
| HORVU1Hr1G075550.1 | Barley | plastid | 93.85 | 83.57 |
| GSMUA_Achr4P08240_001 | Banana | cytosol | 61.86 | 75.05 |
| GSMUA_Achr1P04940_001 | Banana | cytosol | 62.39 | 73.5 |
| Bra011387.1-P | Field mustard | cytosol | 58.88 | 72.35 |
| CDX68896 | Canola | cytosol | 58.88 | 72.35 |
| CDX75291 | Canola | cytosol | 58.88 | 72.35 |
| CDY48604 | Canola | cytosol | 59.58 | 71.67 |
| AT4G32840.1 | Thale cress | cytosol | 58.0 | 71.43 |
| VIT_11s0016g02850.t01 | Wine grape | cytosol | 61.51 | 71.28 |
| KRH60181 | Soybean | cytosol, nucleus | 58.88 | 71.13 |
| VIT_04s0008g00520.t01 | Wine grape | cytosol | 60.63 | 70.7 |
| CDY06829 | Canola | cytosol | 59.4 | 70.56 |
| AT4G29220.1 | Thale cress | cytosol | 58.52 | 70.4 |
| KRH41464 | Soybean | cytosol | 58.52 | 70.4 |
| CDY69051 | Canola | cytosol | 58.88 | 70.23 |
| Solyc12g095880.1.1 | Tomato | cytosol | 59.75 | 70.1 |
| TraesCS7A01G106800.1 | Wheat | cytosol | 60.63 | 69.84 |
| AT5G56630.1 | Thale cress | cytosol | 59.4 | 69.69 |
| CDY41800 | Canola | cytosol | 59.23 | 69.48 |
| CDY11911 | Canola | cytosol | 58.35 | 69.46 |
| KRH44258 | Soybean | cytosol | 55.89 | 69.43 |
| CDY20715 | Canola | cytosol | 59.75 | 69.39 |
| Solyc07g045160.2.1 | Tomato | cytosol | 59.58 | 69.18 |
| KRH47193 | Soybean | cytosol | 56.41 | 69.18 |
| AT4G26270.1 | Thale cress | cytosol | 59.4 | 69.12 |
| CDY32769 | Canola | cytosol | 44.82 | 69.11 |
| Bra026452.1-P | Field mustard | cytosol | 59.4 | 68.98 |
| Bra006864.1-P | Field mustard | cytosol | 58.7 | 68.87 |
| Bra002801.1-P | Field mustard | cytosol | 59.05 | 68.85 |
| CDY32873 | Canola | cytosol | 59.05 | 68.85 |
| CDX89351 | Canola | cytosol | 59.05 | 68.71 |
| CDX94352 | Canola | cytosol | 59.05 | 68.71 |
| CDX88580 | Canola | cytosol | 58.52 | 68.66 |
| PGSC0003DMT400070848 | Potato | cytosol | 56.41 | 68.59 |
| KRH62114 | Soybean | endoplasmic reticulum | 61.34 | 68.57 |
| PGSC0003DMT400065447 | Potato | cytosol | 58.0 | 68.18 |
| PGSC0003DMT400044886 | Potato | cytosol | 59.58 | 67.26 |
| KRH23377 | Soybean | cytosol | 56.77 | 67.15 |
| TraesCS3A01G107600.1 | Wheat | cytosol | 62.74 | 66.73 |
| Solyc08g066100.2.1 | Tomato | cytosol | 58.52 | 66.6 |
| GSMUA_Achr4P01040_001 | Banana | cytosol | 62.74 | 65.87 |
| KRH52812 | Soybean | endoplasmic reticulum | 61.86 | 64.59 |
| Bra011089.1-P | Field mustard | cytosol, plastid | 60.46 | 64.42 |
| Solyc04g072580.1.1 | Tomato | cytosol | 55.89 | 63.73 |
| GSMUA_Achr4P15420_001 | Banana | cytosol | 40.42 | 63.71 |
| CDY02131 | Canola | plastid | 59.4 | 63.53 |
| CDY23054 | Canola | plastid | 59.23 | 63.35 |
| KRH74196 | Soybean | endoplasmic reticulum | 59.93 | 63.27 |
| KRH49011 | Soybean | endoplasmic reticulum | 59.58 | 63.25 |
| Bra012940.1-P | Field mustard | plastid | 58.88 | 62.97 |
| AT5G61580.1 | Thale cress | plastid | 58.35 | 62.64 |
| KRH34610 | Soybean | plastid | 56.94 | 62.07 |
| VIT_16s0013g01140.t01 | Wine grape | plastid | 58.0 | 61.91 |
| PGSC0003DMT400095815 | Potato | cytosol | 16.87 | 61.54 |
| KRH09958 | Soybean | nucleus | 56.41 | 61.49 |
| TraesCS3A01G277700.1 | Wheat | cytosol | 80.14 | 59.45 |
| Solyc03g093520.2.1 | Tomato | plastid | 55.89 | 59.0 |
| CDY65216 | Canola | cytosol, mitochondrion | 5.27 | 47.62 |
| TraesCS2A01G331700.1 | Wheat | golgi | 38.66 | 46.91 |
| OQU78332 | Sorghum | mitochondrion | 87.17 | 45.55 |
| KRH55292 | Soybean | extracellular | 6.15 | 42.17 |
| TraesCS5A01G226600.2 | Wheat | plastid | 38.31 | 41.13 |
| TraesCS5A01G092600.1 | Wheat | plastid | 37.79 | 40.87 |
| TraesCS7A01G088100.1 | Wheat | plastid | 37.79 | 40.64 |
| TraesCS4A01G387000.2 | Wheat | plastid | 37.79 | 40.19 |
| KRG92178 | Soybean | cytosol, plastid | 22.14 | 37.95 |
| Bra033014.1-P | Field mustard | cytosol | 10.19 | 37.91 |
| CDY72240 | Canola | cytosol | 10.19 | 37.91 |
| CDY68743 | Canola | cytosol, plastid | 9.67 | 37.41 |
| CDY03977 | Canola | cytosol | 10.9 | 35.84 |
| CDX93710 | Canola | mitochondrion | 9.67 | 33.54 |
| CDX99958 | Canola | plastid | 8.96 | 33.12 |
| CDY07887 | Canola | extracellular, plasma membrane | 11.78 | 27.69 |
Protein Annotations
| KEGG:00010+2.7.1.11 | KEGG:00030+2.7.1.11 | KEGG:00051+2.7.1.11 | KEGG:00052+2.7.1.11 | KEGG:00680+2.7.1.11 | MapMan:2.1.1.1.1 |
| Gene3D:3.40.50.450 | InterPro:ATP_PFK | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003872 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005975 | GO:GO:0006002 | GO:GO:0006091 | GO:GO:0006096 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | HAMAP:MF_01981 | PFAM:PF00365 | PIRSF:PIRSF000534 | InterPro:PKF_sf |
| PRINTS:PR00476 | PANTHER:PTHR13697 | PANTHER:PTHR13697:SF28 | InterPro:Phosphofructokinase_dom | InterPro:PyroP-dep_PFK_TP0108 | SUPFAM:SSF53784 |
| EnsemblPlantsGene:TraesCS1A01G344000 | EnsemblPlants:TraesCS1A01G344000.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1A:+:532249031..532253869
Molecular Weight (calculated)
62245.7 Da
IEP (calculated)
7.080
GRAVY (calculated)
-0.371
Length
569 amino acids
Sequence
(BLAST)
(BLAST)
001: MASHIILPPD GDDDEQQRRE DEENDGGGSG SGGDGEQQQQ GGGNAKAALP FSAMCVRISR DSYPNLRALR NASHASLTDA AYVKISEGDF GYVLDDVPHL
101: ADYIPDVPTY PNPLQDHPAY STVKQYFVNE DDTVPQKVVV QKNSRRGVHF RRAGPRQRVN FESDEVKACI VSCGGLCPGL NTVIRELVCG LAHMYNVNNI
201: FGIQNGYKGF YSSNYVAITP KTVNDIHKRG GTVLGTSRGG HDTKKIVDNI QDRGINQVYI IGGDGTQKGA YEIYKEIRKR GLKVAVAGVP KTIDNDIAII
301: DKSFGFDSAV EEAQRAINSA HVEACSAENG IGLVKLMGRY SGFIAMYATL ASRDVDCCLI PESPFYMDGE GGLLQYVERR LKENKHMVIV VAEGAGQDII
401: AKSIPASDQL DASGNKLLLD IGLWLTHKIK DHFKSKKMEM TIKYIDPTYM IRAIPSNAAD NVYCTLLAHS AIHGAMAGYS FTVGMVNGRH AYIPFYRVTS
501: TRNKVKITDR MWARLLSSTN QPSFLSQKDI DEAREADRLA NKPPLPSVAN HNVARAFDQS AATSSNGEI
101: ADYIPDVPTY PNPLQDHPAY STVKQYFVNE DDTVPQKVVV QKNSRRGVHF RRAGPRQRVN FESDEVKACI VSCGGLCPGL NTVIRELVCG LAHMYNVNNI
201: FGIQNGYKGF YSSNYVAITP KTVNDIHKRG GTVLGTSRGG HDTKKIVDNI QDRGINQVYI IGGDGTQKGA YEIYKEIRKR GLKVAVAGVP KTIDNDIAII
301: DKSFGFDSAV EEAQRAINSA HVEACSAENG IGLVKLMGRY SGFIAMYATL ASRDVDCCLI PESPFYMDGE GGLLQYVERR LKENKHMVIV VAEGAGQDII
401: AKSIPASDQL DASGNKLLLD IGLWLTHKIK DHFKSKKMEM TIKYIDPTYM IRAIPSNAAD NVYCTLLAHS AIHGAMAGYS FTVGMVNGRH AYIPFYRVTS
501: TRNKVKITDR MWARLLSSTN QPSFLSQKDI DEAREADRLA NKPPLPSVAN HNVARAFDQS AATSSNGEI
001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK
Arabidopsis Description
PFK3ATP-dependent 6-phosphofructokinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94AA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.