CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41464	Soybean	cytosol	98.09	97.67
GSMUA_Achr4P08240_001	Banana	cytosol	78.98	79.32
VIT_11s0016g02850.t01	Wine grape	cytosol	81.32	78.0
GSMUA_Achr1P04940_001	Banana	cytosol	79.62	77.64
KRH47193	Soybean	cytosol	76.43	77.59
KRH44258	Soybean	cytosol	74.95	77.07
GSMUA_Achr2P16600_001	Banana	cytosol	80.04	76.94
GSMUA_Achr7P13640_001	Banana	cytosol	78.56	76.13
KRH49011	Soybean	endoplasmic reticulum	84.93	74.63
KRH74196	Soybean	endoplasmic reticulum	85.14	74.4
KRH62114	Soybean	endoplasmic reticulum	80.25	74.26
Solyc07g045160.2.1	Tomato	cytosol	77.07	74.08
PGSC0003DMT400070848	Potato	cytosol	73.25	73.72
KRH23377	Soybean	cytosol	75.16	73.6
PGSC0003DMT400044886	Potato	cytosol	77.07	72.02
KRH52812	Soybean	endoplasmic reticulum	81.53	70.46
GSMUA_Achr4P01040_001	Banana	cytosol	79.41	69.0
Solyc04g072580.1.1	Tomato	cytosol	71.97	67.94
GSMUA_Achr4P15420_001	Banana	cytosol	52.02	67.87
KRH09958	Soybean	nucleus	74.52	67.24
PGSC0003DMT400095815	Potato	cytosol	21.02	63.46
GSMUA_Achr7P10770_001	Banana	cytosol	63.69	62.11
KRH34610	Soybean	plastid	67.09	60.54
Os05t0524400-01	Rice	nucleus	72.19	59.96
TraesCS1B01G357000.1	Wheat	cytosol	71.13	59.19
TraesCS1D01G346200.1	Wheat	golgi	71.13	58.88
TraesCS1A01G344000.1	Wheat	nucleus	71.13	58.88
Zm00001d038775_P002	Maize	extracellular	71.34	58.43
TraesCS3B01G311900.2	Wheat	cytosol	72.19	53.8
HORVU1Hr1G075550.1	Barley	plastid	71.34	52.58
HORVU3Hr1G070300.3	Barley	cytosol, plastid	72.19	51.75
KRH51223	Soybean	endoplasmic reticulum, nucleus	49.47	50.76
KRH55292	Soybean	extracellular	8.7	49.4
TraesCS3A01G277700.1	Wheat	cytosol	72.4	44.46
Zm00001d043563_P002	Maize	cytosol, extracellular	71.55	44.11
TraesCS3D01G278000.1	Wheat	cytosol	72.61	44.07
OQU87495	Sorghum	cytosol	72.4	43.66
KRH45569	Soybean	plastid	45.22	40.04
KRG99447	Soybean	nucleus, plastid	45.22	39.89
KRG92178	Soybean	cytosol, plastid	27.81	39.46
KRH74511	Soybean	plastid	44.8	38.09
OQU78332	Sorghum	mitochondrion	71.76	31.04
KRH69652	Soybean	plastid	22.93	26.6

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	EntrezGene:100795344
MapMan:2.1.1.1.1	Gene3D:3.40.50.450	EMBL:ACUP02003352	InterPro:ATP_PFK	EnsemblPlantsGene:GLYMA_05G224900	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006002	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046872	GO:GO:0061615
UniProt:K7KRS4	ProteinID:KRH60180.1	EnsemblPlants:KRH60181	ProteinID:KRH60181	ProteinID:KRH60181.1	HAMAP:MF_01981
PFAM:PF00365	PIRSF:PIRSF000534	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697	PANTHER:PTHR13697:SF31
MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-7385	InterPro:Phosphofructokinase_dom	InterPro:PyroP-dep_PFK_TP0108
SUPFAM:SSF53784	UniParc:UPI0002339546	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:40366096..40370669

Molecular Weight (calculated)

51841.0 Da

IEP (calculated)

8.134

GRAVY (calculated)

-0.296

Length

471 amino acids

Sequence
(BLAST)

001: MGSSPNSKPK IIRGTAGYVL EDVPHMADYI PDLPTYSNPL QNNPAYSVVK QYFVHIDDSV PQKIIANKDS PRGVHFRRAG PRQRVYFESD DVQAAIVTCG
101: GLCPGLNTVI RELVCALYHM YGVKKILGIN GGYKGFYAHN TITLTPKSVN DIHKRGGTIL GSSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGADRIF
201: EEIRRRRLKV AVVGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESGENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FHLEGPGGLF
301: EFTEKRLKEN GHMVIVIAEG AGQELVSESI QSLHKQDASG NKLLQDVGLW ISQKIKDHFT KQKTMTINLK YIDPTYMIRA VPSNASDNVY CTLLAQSAVH
401: GAMAGYTGFT SGLVNGRQTY IPFYRITEGQ NKVIITDRMW ARLLSSTNQP SFTIAKTVSE EKREEEANGH E

Best Arabidopsis Sequence Match ( AT4G26270.1 )
(BLAST)

001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK

Arabidopsis Description

PFK3ATP-dependent 6-phosphofructokinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94AA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.