CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62114	Soybean	endoplasmic reticulum	90.28	96.66
Solyc12g095880.1.1	Tomato	cytosol	74.31	83.51
Bra011387.1-P	Field mustard	cytosol	69.91	82.29
CDX68896	Canola	cytosol	69.91	82.29
CDX75291	Canola	cytosol	69.72	82.07
AT4G32840.1	Thale cress	cytosol	69.17	81.6
VIT_04s0008g00520.t01	Wine grape	cytosol	73.03	81.56
KRH60181	Soybean	cytosol, nucleus	70.46	81.53
GSMUA_Achr2P16600_001	Banana	cytosol	72.84	81.02
KRH41464	Soybean	cytosol	70.09	80.76
GSMUA_Achr7P13640_001	Banana	cytosol	71.01	79.63
PGSC0003DMT400065447	Potato	cytosol	70.64	79.55
GSMUA_Achr4P08240_001	Banana	cytosol	68.26	79.32
GSMUA_Achr1P04940_001	Banana	cytosol	70.09	79.09
KRH47193	Soybean	cytosol	66.79	78.45
KRH44258	Soybean	cytosol	64.95	77.29
Solyc08g066100.2.1	Tomato	cytosol	70.46	76.8
KRH23377	Soybean	cytosol	66.97	75.88
KRH49011	Soybean	endoplasmic reticulum	73.03	74.25
KRH74196	Soybean	endoplasmic reticulum	73.21	74.03
GSMUA_Achr4P01040_001	Banana	cytosol	71.56	71.96
KRH09958	Soybean	nucleus	66.42	69.35
GSMUA_Achr4P15420_001	Banana	cytosol	45.32	68.42
GSMUA_Achr7P10770_001	Banana	cytosol	58.72	66.25
KRH34610	Soybean	plastid	61.28	63.98
Os05t0524400-01	Rice	nucleus	64.95	62.43
TraesCS1B01G357000.1	Wheat	cytosol	64.4	62.01
TraesCS1A01G344000.1	Wheat	nucleus	64.59	61.86
TraesCS1D01G346200.1	Wheat	golgi	64.4	61.69
Zm00001d038775_P002	Maize	extracellular	64.4	61.04
TraesCS3B01G311900.2	Wheat	cytosol	64.77	55.85
HORVU1Hr1G075550.1	Barley	plastid	64.95	55.4
HORVU3Hr1G070300.3	Barley	cytosol, plastid	64.77	53.73
KRH51223	Soybean	endoplasmic reticulum, nucleus	42.94	50.98
Zm00001d043563_P002	Maize	cytosol, extracellular	65.5	46.73
TraesCS3A01G277700.1	Wheat	cytosol	65.5	46.55
OQU87495	Sorghum	cytosol	66.06	46.09
TraesCS3D01G278000.1	Wheat	cytosol	65.5	46.01
KRH55292	Soybean	extracellular	6.42	42.17
KRG99447	Soybean	nucleus, plastid	40.18	41.01
KRH45569	Soybean	plastid	39.63	40.6
KRG92178	Soybean	cytosol, plastid	24.4	40.06
KRH74511	Soybean	plastid	39.27	38.63
OQU78332	Sorghum	mitochondrion	64.59	32.32
KRH69652	Soybean	plastid	20.0	26.85

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	EntrezGene:100803139
MapMan:2.1.1.1.1	Gene3D:3.40.50.450	EMBL:ACUP02003436	InterPro:ATP_PFK	ncoils:Coil	EnsemblPlantsGene:GLYMA_06G088600
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006002
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046872
GO:GO:0061615	UniProt:I1K9I0	EnsemblPlants:KRH52812	ProteinID:KRH52812	ProteinID:KRH52812.1	HAMAP:MF_01981
PFAM:PF00365	PIRSF:PIRSF000534	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697	PANTHER:PTHR13697:SF31
MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-7385	InterPro:Phosphofructokinase_dom	InterPro:PyroP-dep_PFK_TP0108
SUPFAM:SSF53784	UniParc:UPI00023C356F	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:6866351..6873001

Molecular Weight (calculated)

60160.9 Da

IEP (calculated)

6.909

GRAVY (calculated)

-0.267

Length

545 amino acids

Sequence
(BLAST)

001: MASNDSDSQM KIVHGDAGYI LEDVPHFADY IPNLPVFSLS LSLFRSSSIT YANCIALTHS LADRLCTTFF FLQTYPNPLR SNPAYSVVKQ YFVHMDDTVP
101: QKVVVHKDSP RGVHFRRAGP RQKVYFKSDE VHACIVTCGG LCPGLNTVIR EIVCGLSYMY GVNKVLGIDG GYRGFYSKNT ITLTPKVVND IHKRGGTILG
201: TSRGGHDTGK IVDSIQDRGI NQVYIIGGDG TQRGATVIYE EVRRRGLKVA IAGIPKTIDN DIPVIDKSFG FDTAVEEAQR AINAAHVEAE SIENGIGVVK
301: LMGRYSGFIA MYATLASRDV DCCLIPESPF YLEGKGGLFE FIEKRLKENG HMVIVIAEGA GQDLLTESMQ AMDQKDASGN KLLQDVGLWI SHKIKDHFAR
401: KDKMPINLKY IDPTYMIRAI PSNASDNVYC TLLAQSAVHG AMAGYTGFTV GLVNGRQTYI PFIRINERQN KVVITDRMWA RLLSSTNQPS FLSPKDLEEA
501: KKAESPTQLL EENNCNDVGD AEKEQPPKDE QESGNHTDNG IKTQN

Best Arabidopsis Sequence Match ( AT5G56630.1 )
(BLAST)

001: MSSPRSNKPK IVNGPGGYIL QDVPHLIDYL PDLPTYPNPL QDNPAYSVVK QYFVHADDSV PEKVVVHKDG PRGVHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REVVSSLSYM YGVKRILGID GGYRGFYAKN TIPLNSKVVN DIHKRGGTII GTSRGGHDTN KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRRLKV AVVGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESNENGIGFV KLMGRYSGYI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EFIERRLKDH GHMVIVLAEG AGQDLMCKSM ESTPMDASGN KLLKDVGLWL SQSIKDHFKK NKMVMNLKYI DPTYMIRAVP SNASDNVYCT LLAQSAVHGA
401: MAGYTGYTSG LVNGRQTYIP FYRITETQNN VVITDRMWAR LLSSTNQPSF LGPKDTSEEK KELPETPLLD DGAVDIPPVT KEVTK

Arabidopsis Description

PFK7ATP-dependent 6-phosphofructokinase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5J7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.