CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 6
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74196	Soybean	endoplasmic reticulum	95.52	94.99
KRH60181	Soybean	cytosol, nucleus	74.63	84.93
KRH41464	Soybean	cytosol	73.88	83.72
VIT_11s0016g02850.t01	Wine grape	cytosol	73.32	80.04
GSMUA_Achr4P08240_001	Banana	cytosol	68.84	78.68
GSMUA_Achr1P04940_001	Banana	cytosol	69.78	77.43
KRH62114	Soybean	endoplasmic reticulum	73.32	77.21
KRH47193	Soybean	cytosol	66.6	76.94
GSMUA_Achr7P13640_001	Banana	cytosol	69.59	76.75
KRH44258	Soybean	cytosol	65.3	76.42
GSMUA_Achr2P16600_001	Banana	cytosol	69.4	75.92
Solyc07g045160.2.1	Tomato	cytosol	69.03	75.51
KRH23377	Soybean	cytosol	66.6	74.22
PGSC0003DMT400044886	Potato	cytosol	69.03	73.41
KRH52812	Soybean	endoplasmic reticulum	74.25	73.03
PGSC0003DMT400070848	Potato	cytosol	63.62	72.86
GSMUA_Achr4P01040_001	Banana	cytosol	70.71	69.93
Solyc04g072580.1.1	Tomato	cytosol	64.18	68.94
KRH09958	Soybean	nucleus	65.86	67.62
GSMUA_Achr4P15420_001	Banana	cytosol	44.78	66.48
KRH34610	Soybean	plastid	61.01	62.64
GSMUA_Achr7P10770_001	Banana	cytosol	56.34	62.53
Os05t0524400-01	Rice	nucleus	65.3	61.73
PGSC0003DMT400095815	Potato	cytosol	17.91	61.54
Zm00001d038775_P002	Maize	extracellular	64.93	60.52
TraesCS1B01G357000.1	Wheat	cytosol	63.25	59.89
TraesCS1D01G346200.1	Wheat	golgi	63.25	59.58
TraesCS1A01G344000.1	Wheat	nucleus	63.25	59.58
TraesCS3B01G311900.2	Wheat	cytosol	64.74	54.91
HORVU1Hr1G075550.1	Barley	plastid	63.43	53.21
HORVU3Hr1G070300.3	Barley	cytosol, plastid	65.11	53.12
KRH51223	Soybean	endoplasmic reticulum, nucleus	43.47	50.76
Zm00001d043563_P002	Maize	cytosol, extracellular	65.11	45.68
TraesCS3A01G277700.1	Wheat	cytosol	65.11	45.5
TraesCS3D01G278000.1	Wheat	cytosol	65.3	45.1
OQU87495	Sorghum	cytosol	65.67	45.07
KRH55292	Soybean	extracellular	6.72	43.37
KRG99447	Soybean	nucleus, plastid	40.86	41.01
KRH45569	Soybean	plastid	40.3	40.6
KRG92178	Soybean	cytosol, plastid	24.81	40.06
KRH74511	Soybean	plastid	40.3	38.99
OQU78332	Sorghum	mitochondrion	65.11	32.05
KRH69652	Soybean	plastid	20.15	26.6

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	EntrezGene:100776597
MapMan:2.1.1.1.1	Gene3D:3.40.50.450	EMBL:ACUP02004328	InterPro:ATP_PFK	ncoils:Coil	EnsemblPlantsGene:GLYMA_07G126400
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006002
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046872
GO:GO:0061615	UniProt:I1KJS2	EnsemblPlants:KRH49011	ProteinID:KRH49011	ProteinID:KRH49011.1	HAMAP:MF_01981
PFAM:PF00365	PIRSF:PIRSF000534	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697	PANTHER:PTHR13697:SF31
MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-7385	InterPro:Phosphofructokinase_dom	InterPro:PyroP-dep_PFK_TP0108
SUPFAM:SSF53784	UniParc:UPI0002338C03	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:15077988..15082819

Molecular Weight (calculated)

58520.4 Da

IEP (calculated)

7.625

GRAVY (calculated)

-0.334

Length

536 amino acids

Sequence
(BLAST)

001: MDSNSSSPSP NNHASTTKIN GFFHPKPGSQ PATSSRSRLA MASPVNSDPK VVTGTAGYIL EDVPHFTDYI PNLPTYPNPL QDNPAYSVVK QYFVHVDDSV
101: PQKVVVHKDG ARGVHFRRAG PRQKVYFEAD EVQAAIVTCG GLCPGLNTVI RELVCGLHHM YGVKRVLGIN GGYRGFYARN TITLTPKSVN DIHKRGGTVL
201: GTSRGGHDTK KIVDSIQDRG INQVYIIGGD GTQKGASAIF EEVRRRGLKV SVVGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESVENGIGVV
301: KLMGRNSGFI AMYATLASRD VDCCLIPESP FYLEGTGGLY EYIEKRLKEN GHMVIVIAEG AGQELVSESV QSMSKQDASG NKLFQDVGLW ISQKIRDHFA
401: AQKTLPITLK YIDPTYMIRA IPSNASDNVY CTLLAQSAVH GAMAGYTGYT SGLVNGRQTY IPFYRITERQ NHVVITDRMW ARLLSSTNQP SFLDSKGDNE
501: EKKEEEAALN QLPDGHCSKD TSLANKEINS IYPTTC

Best Arabidopsis Sequence Match ( AT4G26270.1 )
(BLAST)

001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK

Arabidopsis Description

PFK3ATP-dependent 6-phosphofructokinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94AA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.