CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23377	Soybean	cytosol	90.04	97.71
KRH47193	Soybean	cytosol	71.07	79.96
KRH44258	Soybean	cytosol	69.54	79.26
KRH60181	Soybean	cytosol, nucleus	67.24	74.52
KRH41464	Soybean	cytosol	67.05	74.0
GSMUA_Achr7P13640_001	Banana	cytosol	68.58	73.66
GSMUA_Achr4P08240_001	Banana	cytosol	65.71	73.13
GSMUA_Achr2P16600_001	Banana	cytosol	68.58	73.06
GSMUA_Achr1P04940_001	Banana	cytosol	66.48	71.84
KRH62114	Soybean	endoplasmic reticulum	68.77	70.53
KRH52812	Soybean	endoplasmic reticulum	69.35	66.42
KRH74196	Soybean	endoplasmic reticulum	68.01	65.86
KRH49011	Soybean	endoplasmic reticulum	67.62	65.86
GSMUA_Achr4P15420_001	Banana	cytosol	44.25	63.99
GSMUA_Achr4P01040_001	Banana	cytosol	66.28	63.84
GSMUA_Achr7P10770_001	Banana	cytosol	56.9	61.49
KRH34610	Soybean	plastid	59.58	59.58
Os05t0524400-01	Rice	nucleus	62.45	57.5
TraesCS1B01G357000.1	Wheat	cytosol	61.3	56.54
TraesCS1A01G344000.1	Wheat	nucleus	61.49	56.41
TraesCS1D01G346200.1	Wheat	golgi	61.3	56.24
Zm00001d038775_P002	Maize	extracellular	61.69	56.0
TraesCS3B01G311900.2	Wheat	cytosol	62.26	51.42
HORVU1Hr1G075550.1	Barley	plastid	62.07	50.7
HORVU3Hr1G070300.3	Barley	cytosol, plastid	62.84	49.92
KRH51223	Soybean	endoplasmic reticulum, nucleus	43.87	49.89
Zm00001d043563_P002	Maize	cytosol, extracellular	62.45	42.67
TraesCS3A01G277700.1	Wheat	cytosol	62.45	42.5
OQU87495	Sorghum	cytosol	63.22	42.25
TraesCS3D01G278000.1	Wheat	cytosol	62.64	42.14
KRG99447	Soybean	nucleus, plastid	41.76	40.82
KRH45569	Soybean	plastid	41.57	40.79
KRH74511	Soybean	plastid	41.38	38.99
KRH55292	Soybean	extracellular	6.13	38.55
KRG92178	Soybean	cytosol, plastid	23.56	37.05
OQU78332	Sorghum	mitochondrion	63.22	30.3
KRH69652	Soybean	plastid	20.88	26.85

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	EntrezGene:100815278
MapMan:2.1.1.1.1	Gene3D:3.40.50.450	EMBL:ACUP02009115	InterPro:ATP_PFK	ncoils:Coil	EnsemblPlantsGene:GLYMA_15G020900
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006002
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046872
GO:GO:0061615	UniProt:I1MCW0	EnsemblPlants:KRH09958	ProteinID:KRH09958	ProteinID:KRH09958.1	HAMAP:MF_01981
PFAM:PF00365	PIRSF:PIRSF000534	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697	PANTHER:PTHR13697:SF31
MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-7385	InterPro:Phosphofructokinase_dom	InterPro:PyroP-dep_PFK_TP0108
SUPFAM:SSF53784	UniParc:UPI00023D2697	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:1612700..1617078

Molecular Weight (calculated)

57132.2 Da

IEP (calculated)

6.415

GRAVY (calculated)

-0.182

Length

522 amino acids

Sequence
(BLAST)

001: MIIGGPSSQI KVKTLWCAAE TSVSHENLTK LNCGITVSNS TMLDSATPHD KITTAASGFV LEDVPHLSAY IPHLQTYPDP LQDNPSYSVV AQYYVNVDDT
101: IAQQIVVHKN SPRGTHFRRA GPAQKVYFDS EEVHACIVTC GGLCPGLNTV IREIVCGLYH MYGVHKVLGI QGGYPGFYSR NTVPLTPKVV NDIHKRGGSI
201: LGTSYGGHDT SKIVDSIQDR GINQVYILGG YGTQYEAAMI FEEVRRRGLK VAVVGIPKTI DNDIPVIDKS IGFDTAVEEA QRAINSAHVE AESAENGIGV
301: VKLMGRYSGF IAMYATLASR DVDCCLIPES PFYLEGPGGL LEFIEKRLKE QGHMVIVIAE GAGQELLSGN PSIVNKPDAS ADKLFPDVGL WLSQKIKDHF
401: EKRQKMAINL KYIDPTYMIR AIPSNASDNV YCTLLAQSAV HGAMAGYTGF TVGPVNGRNC YIPFHLINEG EKRVVITDRM WARLLSSTHQ PCFLNPKEIT
501: GEREERTENQ TTDGQNHSEI AD

Best Arabidopsis Sequence Match ( AT4G26270.1 )
(BLAST)

001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK

Arabidopsis Description

PFK3ATP-dependent 6-phosphofructokinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94AA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.