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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, nucleus

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 endoplasmic reticulum: 27224218
nucleus: 27291164
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG89812
KRG92178
KRG94975
KRH18664
KRH51223

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G47810.1 KRG89812 AT2G41090.1 17360592
AT5G47810.1 KRG94975 AT2G41090.1 17360592
AT5G47810.1 KRH18664 AT2G41090.1 17360592
AT5G47810.1 KRG89812 AT5G21274.1 17360592
AT5G47810.1 KRG94975 AT5G21274.1 17360592
AT5G47810.1 KRH18664 AT5G21274.1 17360592
AT5G47810.1 KRH51223 AT5G47810.1 21798944
AT5G47810.1 KRG92178 AT5G56630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77799 Canola cytosol 73.64 76.13
Bra024914.1-P Field mustard cytosol 72.55 75.0
CDY17703 Canola cytosol 72.55 75.0
HORVU2Hr1G081670.3 Barley cytosol, golgi, mitochondrion 60.57 74.93
Solyc04g015200.2.1 Tomato plastid 74.29 74.78
PGSC0003DMT400050810 Potato plastid 74.29 74.78
AT5G47810.1 Thale cress cytosol, mitochondrion 72.11 74.55
VIT_00s0780g00010.t01 Wine grape cytosol 72.55 71.92
GSMUA_Achr5P22470_001 Banana cytosol 71.68 69.85
GSMUA_Achr9P19740_001 Banana cytosol 64.27 69.74
Zm00001d020866_P001 Maize cytosol 21.79 68.03
TraesCS2B01G350500.1 Wheat cytosol 67.1 65.67
TraesCS2D01G331200.1 Wheat cytosol 66.88 65.46
TraesCS2A01G331700.1 Wheat golgi 66.88 65.46
Zm00001d025659_P001 Maize cytosol, plastid 66.88 64.36
EES12338 Sorghum cytosol 67.54 64.05
Os09t0479800-01 Rice cytosol, plasma membrane 64.05 63.23
Os04t0469500-01 Rice plasma membrane 64.71 60.99
TraesCS4B01G125000.1 Wheat cytosol 9.8 58.44
KXG26277 Sorghum cytosol 18.74 54.43
KRH44258 Soybean cytosol 50.33 50.44
KRH60181 Soybean cytosol, nucleus 50.76 49.47
KRH47193 Soybean cytosol 49.67 49.14
KRH41464 Soybean cytosol 50.33 48.84
KRH23377 Soybean cytosol 49.89 47.61
KRH62114 Soybean endoplasmic reticulum 50.98 45.97
KRH34610 Soybean plastid 51.63 45.4
KRH09958 Soybean nucleus 49.89 43.87
KRH49011 Soybean endoplasmic reticulum 50.76 43.47
KRH74196 Soybean endoplasmic reticulum 50.98 43.41
KRH52812 Soybean endoplasmic reticulum 50.98 42.94
KRG99447 Soybean nucleus, plastid 43.57 37.45
KRH45569 Soybean plastid 43.14 37.22
KRH74511 Soybean plastid 42.7 35.38
KRG92178 Soybean cytosol, plastid 23.75 32.83
KRH69652 Soybean plastid 21.79 24.63
KRH55292 Soybean extracellular 3.92 21.69
Protein Annotations
KEGG:00010+2.7.1.11KEGG:00030+2.7.1.11KEGG:00051+2.7.1.11KEGG:00052+2.7.1.11KEGG:00680+2.7.1.11EntrezGene:100807957
Gene3D:3.40.50.450MapMan:35.1EMBL:ACUP02004730InterPro:ATP_PFKEnsemblPlantsGene:GLYMA_07G269500GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0003872GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0005975GO:GO:0006002
GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0046872
GO:GO:0061615UniProt:I1KNN0EnsemblPlants:KRH51223ProteinID:KRH51223ProteinID:KRH51223.1HAMAP:MF_01981
PFAM:PF00365PIRSF:PIRSF000534InterPro:PKF_sfPRINTS:PR00476PANTHER:PTHR13697PANTHER:PTHR13697:SF11
MetaCyc:PWY-1042MetaCyc:PWY-1861MetaCyc:PWY-5484MetaCyc:PWY-7385InterPro:Phosphofructokinase_domInterPro:PyroP-dep_PFK_TP0108
SUPFAM:SSF53784UniParc:UPI00023391D4SEG:seg:::
Description
hypothetical protein
Coordinates
chr7:-:44246486..44248719
Molecular Weight (calculated)
51109.0 Da
IEP (calculated)
6.695
GRAVY (calculated)
-0.167
Length
459 amino acids
Sequence
(BLAST)
001: MASEEAECIS NLFKPIYLKE VAELRQYVPN LQSRPNPLDH NPYFDTRQLQ QQQGFYLTES DVLLRQIGND LSPSPRFAYH RAGPRKNIYF DPSIVRVAIV
101: TCGGLCPGLN TVIRELVVGL WQLYGVRHIF GITAGYRGFY SSVPLPLNPK LVHHWHNVGG TLLQTSRGGF DLHNIVDAIQ THAFNQVYII GGDGTMRGAV
201: KIFDEIKHRK LEVAVVGIPK TVDNDVGIID RSFGFQTAVE MAQEAISAAH VEAESAVNGI GLVKLMGRST GHIALHATLS SRDVDCCLIP EIDFFLEGKG
301: GLLEFLGQRL KENGHAVLVV AEGAGQDIIP RTDSQKDERD ESGNPVFLDV GVWLKSELNK WWKREHPNEL FTVKYIDPTY MIRAVHANAT DNLYCTLLAH
401: SAIHGVMAGY TGFVAGPING NYAYIPLEDV ARANNPVDTQ DHKWSWVRSV TNQPDFVRR
Best Arabidopsis Sequence Match ( AT5G47810.1 )
(BLAST)
001: MAAETSIRKL PSLSGLRHRR NPLEDNPYFH PSNGFYITPS DVILAQVAYD HSAHSQSRVA YHRAGPRREI MYEPSAVKAA IVTCGGLCPG MNTVIRELVV
101: GLWELYGVRE IYGIPAGYRG FYSMKAVKLD PKAVHDWHKK GGTVLATSRG GFHLQKIVDA IHLNGYNQVY IIGGDGTMRG AVEIFKEISL RKLEVGITVI
201: PKTVDNDVGI IDRSFGFQTA VEMAQEAISA AHVEAESAVN GIGLVKLMGR STGHIALHAT LSSRDVDCCL IPEMDFYLEG KGGLFEFLEK RLKERGHAVL
301: VVAEGAGQEM IPRNESQKQE RDESGNAVFL DVGVWFKSVL KAWWEREHPD ELFTVKYIDP TYMIRAVPAN ATDNLYCTLL AHSAIHGVMA GYTGFVPGPI
401: NGNYAYIPLE EVAQTKNQVN TRDHKWAWVR SVTNQPDFET NVKG
Arabidopsis Description
PFK2ATP-dependent 6-phosphofructokinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK0]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.