CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 6
cytosol 3

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49011	Soybean	endoplasmic reticulum	94.99	95.52
KRH60181	Soybean	cytosol, nucleus	74.4	85.14
KRH41464	Soybean	cytosol	73.65	83.93
VIT_11s0016g02850.t01	Wine grape	cytosol	72.54	79.63
GSMUA_Achr4P08240_001	Banana	cytosol	68.46	78.68
GSMUA_Achr1P04940_001	Banana	cytosol	69.57	77.64
KRH62114	Soybean	endoplasmic reticulum	73.1	77.41
KRH47193	Soybean	cytosol	66.6	77.37
KRH44258	Soybean	cytosol	65.68	77.29
GSMUA_Achr7P13640_001	Banana	cytosol	69.39	76.95
GSMUA_Achr2P16600_001	Banana	cytosol	69.02	75.92
Solyc07g045160.2.1	Tomato	cytosol	68.27	75.1
KRH23377	Soybean	cytosol	66.42	74.43
KRH52812	Soybean	endoplasmic reticulum	74.03	73.21
PGSC0003DMT400044886	Potato	cytosol	68.27	73.02
PGSC0003DMT400070848	Potato	cytosol	62.71	72.22
GSMUA_Achr4P01040_001	Banana	cytosol	70.13	69.74
Solyc04g072580.1.1	Tomato	cytosol	63.08	68.14
KRH09958	Soybean	nucleus	65.86	68.01
GSMUA_Achr4P15420_001	Banana	cytosol	44.34	66.2
GSMUA_Achr7P10770_001	Banana	cytosol	55.84	62.32
KRH34610	Soybean	plastid	60.3	62.26
Os05t0524400-01	Rice	nucleus	65.31	62.08
PGSC0003DMT400095815	Potato	cytosol	17.63	60.9
Zm00001d038775_P002	Maize	extracellular	64.75	60.7
TraesCS1B01G357000.1	Wheat	cytosol	63.27	60.25
TraesCS1D01G346200.1	Wheat	golgi	63.27	59.93
TraesCS1A01G344000.1	Wheat	nucleus	63.27	59.93
TraesCS3B01G311900.2	Wheat	cytosol	64.19	54.75
HORVU1Hr1G075550.1	Barley	plastid	63.45	53.52
HORVU3Hr1G070300.3	Barley	cytosol, plastid	64.56	52.97
KRH51223	Soybean	endoplasmic reticulum, nucleus	43.41	50.98
Zm00001d043563_P002	Maize	cytosol, extracellular	64.56	45.55
TraesCS3A01G277700.1	Wheat	cytosol	64.56	45.37
TraesCS3D01G278000.1	Wheat	cytosol	64.75	44.97
OQU87495	Sorghum	cytosol	64.94	44.81
KRH55292	Soybean	extracellular	6.86	44.58
KRG99447	Soybean	nucleus, plastid	41.19	41.57
KRH45569	Soybean	plastid	40.45	40.98
KRG92178	Soybean	cytosol, plastid	24.68	40.06
KRH74511	Soybean	plastid	40.45	39.35
OQU78332	Sorghum	mitochondrion	65.12	32.23
KRH69652	Soybean	plastid	19.85	26.35

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	EntrezGene:100793844
MapMan:2.1.1.1.1	Gene3D:3.40.50.450	EMBL:ACUP02000008	InterPro:ATP_PFK	ncoils:Coil	EnsemblPlantsGene:GLYMA_01G005400
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006002
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046872
GO:GO:0061615	UniProt:I1J4F8	EnsemblPlants:KRH74196	ProteinID:KRH74196	ProteinID:KRH74196.1	HAMAP:MF_01981
PFAM:PF00365	PIRSF:PIRSF000534	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697	PANTHER:PTHR13697:SF31
MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-7385	InterPro:Phosphofructokinase_dom	InterPro:PyroP-dep_PFK_TP0108
SUPFAM:SSF53784	UniParc:UPI00023BAD62	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:524166..529281

Molecular Weight (calculated)

58869.9 Da

IEP (calculated)

7.265

GRAVY (calculated)

-0.325

Length

539 amino acids

Sequence
(BLAST)

001: MDSSSSSPNN NNNHHASTTK TNGFLIHPKL GFEPARSRSR LAMASPANTS EPKIVTGTAG YILEDVPHFT DYIPNLPTYP NPLQDNPAYS VVKQYFVHVD
101: DSVPQKVVVH KDGARGVHFR RAGPRQKVYF EADEVQAAIV TCGGLCPGLN TVIRELVCGL HHMYGVKKVL GINGGYRGFY ARNTITLTPK SVNDIHKRGG
201: TVLGTSRGGH DTKKIVDSIQ DRGINQVYII GGDGTQKGAS AIFEEVRKRG LKVSVVGIPK TIDNDIPVID KSFGFDTAVE EAQRAINAAH VEAESVENGI
301: GVVKLMGRNS GFIAMYATLA SRDVDCCLIP ESPFYLEGPG GLYEYIEKRL KENGHMVIVI AEGAGQELVS ESVQSMSKQD ASGNKLFQDV GLWISQKIRD
401: HFAAQKTLPI TLKYIDPTYM IRAIPSNASD NVYCTLLAQS AVHGAMAGYT GYTSGLVNGR QTYIPFYRIT ERQNHVVITD RMWARLLSST NQPSFLDAKG
501: DNEEKEEEEA LNQLPDGHCA KDTSLASKEI NSSIYPTAC

Best Arabidopsis Sequence Match ( AT4G26270.1 )
(BLAST)

001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK

Arabidopsis Description

PFK3ATP-dependent 6-phosphofructokinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94AA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.