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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER92016
EER95612
EES09009
OQU78332
OQU80420
OQU87495

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G26270.1 EER92016 AT3G57870.1 21798944
AT4G26270.1 EER95612 AT3G57870.1 21798944
AT4G29220.1 EES09009 AT1G13520.1 21798944
AT4G29220.1 OQU80420 AT1G13520.1 21798944
AT4G29220.1 EER92016 AT3G57870.1 21798944
AT4G29220.1 EER95612 AT3G57870.1 21798944
AT4G29220.1 OQU78332 AT4G29220.1 21798944
AT4G29220.1 OQU87495 AT4G29220.1 21798944
AT5G56630.1 EES09009 AT1G13520.1 21798944
AT5G56630.1 OQU80420 AT1G13520.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043563_P002 Maize cytosol, extracellular 89.63 91.62
TraesCS3B01G311900.2 Wheat cytosol 65.43 80.85
GSMUA_Achr4P08240_001 Banana cytosol 46.48 77.4
GSMUA_Achr1P04940_001 Banana cytosol 46.99 75.98
HORVU3Hr1G070300.3 Barley cytosol, plastid 63.89 75.95
TraesCS3A01G277700.1 Wheat cytosol 74.39 75.75
TraesCS3D01G278000.1 Wheat cytosol 74.39 74.87
Bra011387.1-P Field mustard cytosol 44.17 74.51
CDX75291 Canola cytosol 44.17 74.51
CDX68896 Canola cytosol 44.05 74.3
AT4G32840.1 Thale cress cytosol 43.79 74.03
VIT_04s0008g00520.t01 Wine grape cytosol 45.33 72.54
KRH60181 Soybean cytosol, nucleus 43.66 72.4
Solyc12g095880.1.1 Tomato cytosol 44.94 72.37
VIT_11s0016g02850.t01 Wine grape cytosol 45.45 72.3
KRH47193 Soybean cytosol 42.89 72.2
CDY48604 Canola cytosol 43.66 72.09
KRH41464 Soybean cytosol 43.53 71.88
AT5G56630.1 Thale cress cytosol 44.56 71.75
KRH44258 Soybean cytosol 42.0 71.62
CDY32873 Canola cytosol 44.56 71.31
CDY69051 Canola cytosol 43.53 71.28
Bra002801.1-P Field mustard cytosol 44.43 71.11
Solyc07g045160.2.1 Tomato cytosol 44.56 71.02
CDY06829 Canola cytosol 43.53 70.98
CDY41800 Canola cytosol 44.05 70.93
CDY11911 Canola cytosol 43.41 70.92
AT4G29220.1 Thale cress cytosol 42.77 70.61
CDY20715 Canola cytosol 44.3 70.61
AT4G26270.1 Thale cress cytosol 44.17 70.55
KRH62114 Soybean endoplasmic reticulum 45.97 70.53
CDY32769 Canola cytosol 33.29 70.46
CDX94352 Canola cytosol 44.05 70.35
CDX89351 Canola cytosol 44.05 70.35
Bra026452.1-P Field mustard cytosol 44.05 70.2
Bra006864.1-P Field mustard cytosol 43.53 70.1
CDX88580 Canola cytosol 43.41 69.9
PGSC0003DMT400065447 Potato cytosol 43.28 69.83
PGSC0003DMT400044886 Potato cytosol 44.81 69.44
EES02318 Sorghum cytosol 46.99 69.25
PGSC0003DMT400070848 Potato cytosol 41.49 69.23
KRH23377 Soybean cytosol 42.38 68.81
GSMUA_Achr4P01040_001 Banana cytosol 47.63 68.63
Solyc08g066100.2.1 Tomato cytosol 43.53 68.0
EES17845 Sorghum cytosol 45.71 66.6
GSMUA_Achr4P15420_001 Banana cytosol 30.73 66.48
EER89214 Sorghum cytosol 45.71 66.23
KRH52812 Soybean endoplasmic reticulum 46.09 66.06
KRH49011 Soybean endoplasmic reticulum 45.07 65.67
CDY02131 Canola plastid 44.69 65.6
CDY23054 Canola plastid 44.56 65.41
Bra012940.1-P Field mustard plastid 44.56 65.41
Bra011089.1-P Field mustard cytosol, plastid 44.69 65.36
Solyc04g072580.1.1 Tomato cytosol 41.74 65.33
KRH74196 Soybean endoplasmic reticulum 44.81 64.94
AT5G61580.1 Thale cress plastid 43.79 64.53
KRH34610 Soybean plastid 43.02 64.37
VIT_16s0013g01140.t01 Wine grape plastid 43.79 64.17
KRH09958 Soybean nucleus 42.25 63.22
EER90717 Sorghum cytosol 43.41 63.01
Solyc03g093520.2.1 Tomato plastid 42.0 60.85
PGSC0003DMT400095815 Potato cytosol 11.91 59.62
CDY65216 Canola cytosol, mitochondrion 3.97 49.21
EES12338 Sorghum cytosol 30.09 48.55
KXG26277 Sorghum cytosol 9.09 44.94
OQU78332 Sorghum mitochondrion 59.8 42.88
EER98900 Sorghum plastid 27.91 41.21
KRH55292 Soybean extracellular 4.35 40.96
EER91637 Sorghum cytosol, plastid 26.76 39.89
KRG92178 Soybean cytosol, plastid 16.9 39.76
CDY72240 Canola cytosol 7.55 38.56
Bra033014.1-P Field mustard cytosol 7.55 38.56
CDY68743 Canola cytosol, plastid 7.17 38.1
KXG25278 Sorghum plastid 26.89 37.63
CDY03977 Canola cytosol 7.94 35.84
CDX93710 Canola mitochondrion 7.3 34.76
CDX99958 Canola plastid 6.66 33.77
CDY07887 Canola extracellular, plasma membrane 8.07 26.03
Protein Annotations
KEGG:00010+2.7.1.11KEGG:00030+2.7.1.11KEGG:00051+2.7.1.11KEGG:00052+2.7.1.11KEGG:00680+2.7.1.11MapMan:2.1.1.1.1
Gene3D:3.40.50.450EntrezGene:8062161UniProt:A0A1W0VZF2InterPro:ATP_PFKGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0003872GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005975GO:GO:0006002GO:GO:0006091GO:GO:0006096
GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987
GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0046872GO:GO:0061615HAMAP:MF_01981
EnsemblPlants:OQU87495ProteinID:OQU87495ProteinID:OQU87495.1PFAM:PF00365InterPro:PKF_sfPRINTS:PR00476
PANTHER:PTHR13697PANTHER:PTHR13697:SF28MetaCyc:PWY-1042MetaCyc:PWY-1861MetaCyc:PWY-5484MetaCyc:PWY-7385
InterPro:Phosphofructokinase_domInterPro:PyroP-dep_PFK_TP0108EnsemblPlantsGene:SORBI_3003G290000SUPFAM:SSF53784unigene:Sbi.15083UniParc:UPI0009DC82EB
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:-:62241321..62247901
Molecular Weight (calculated)
84631.4 Da
IEP (calculated)
6.020
GRAVY (calculated)
-0.508
Length
781 amino acids
Sequence
(BLAST)
001: MASSHIILPK EEEEEEKEAA AVAEAGLGVG VEADHDSPAQ RPYQEQAPGK AALPFSATCV RISRDSYPNL RALRNASTMA LHDDDAAFVK IEEGDFGYVL
101: DDVPHLTDYL PDLPTFPNPL QDHPAYSTVK QYFVNADDTV PEKVVVQKNS PRGVHFRRAG PRQRVYFESE EVKACIVTCG GLCPGLNTVI RELVCGLSHM
201: YNVSNVFGIQ NGYKGFYSSN YLPMTPKSVN DIHKRGGTVL GTSRGGHDTK KIVDNIQDRG INQVYIIGGD GTQKGAYEIY KEIRRRGLHV AVAGIPKTID
301: NDIAVIDKSF GFDTAVEEAQ RAINAAHVEA SSAENGIGLV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF EYIDRRLKEN NHMVIVVAEG
401: AGQDLIAQSI PAADQQDASG NKLLLDVGLW LTHKIKDYCK SKKMEMTIKY IDPTYMIRAI PSNASDNVYC TLLAHSAIHG AMAGYSFTVG MVNGRHAYIP
501: FHRVTSTRNK VRITDRMWAR LLSSTNQPSF LSQKDIDAAR EADKAANAKN QSAPALANGT DGVEAQKPPQ QPATDVPVPQ PARPDVDNAR APESVNADDA
601: GAAPRDQEEQ ANEEAETAVP DVTGGTLAQA EVKPIPGTNA SRPAAPPDTP ERDVAPAPRT EHAQAAEMEP ADVDIDTAKP EGCTTPPPPP VHDSEGSDTQ
701: SADGRGSPMH GTQAGASVMK RDVVAASKSR LFAFRSFTRD KKVIKQPAGA ADTASPDRRK AGEACTENKE KGKERRKRFW K
Best Arabidopsis Sequence Match ( AT4G26270.1 )
(BLAST)
001: MSTVESSKPK IINGSCGYVL EDVPHLSDYL PGLPTYPNPL QDNPAYSVVK QYFVDADDSV PQKIVVHKDG PRGIHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REIVSSLSYM YGVKRILGID GGYRGFYAKN TVSLDSKVVN DIHKRGGTIL GTSRGGHDTT KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRGLKV AVIGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESIENGIGVV KLMGRYSGFI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EYIEKRLKES GHMVLVIAEG AGQDLMSKSM ESMTLKDASG NKLLKDVGLW LSQSIKDHFN QKKMVMNLKY IDPTYMIRAV PSNASDNVYC TLLAQSAVHG
401: AMAGYTGYIS GLVNGRQTYI PFYRITEKQN HVVITDRMWA RLLSSTNQPS FLGPKDVFDN KEKPMSALLD DGNCNGVVDV PPVTKEITK
Arabidopsis Description
PFK3ATP-dependent 6-phosphofructokinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94AA4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.