Factsheet for VIT_16s0013g01140.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G61580.1	Thale cress	plastid	76.55	76.98
CDY02131	Canola	plastid	76.55	76.69
CDY23054	Canola	plastid	76.36	76.5
KRH34610	Soybean	plastid	74.86	76.44
Bra012940.1-P	Field mustard	plastid	76.17	76.32
Solyc03g093520.2.1	Tomato	plastid	74.11	73.28
GSMUA_Achr4P08240_001	Banana	cytosol	64.35	73.13
GSMUA_Achr7P13640_001	Banana	cytosol	66.04	72.43
GSMUA_Achr1P04940_001	Banana	cytosol	64.54	71.22
GSMUA_Achr2P16600_001	Banana	cytosol	64.17	69.8
VIT_04s0008g00520.t01	Wine grape	cytosol	63.79	69.67
VIT_11s0016g02850.t01	Wine grape	cytosol	63.98	69.45
GSMUA_Achr4P15420_001	Banana	cytosol	44.09	65.1
GSMUA_Achr4P01040_001	Banana	cytosol	65.1	64.02
Os05t0524400-01	Rice	nucleus	63.04	59.26
TraesCS1B01G357000.1	Wheat	cytosol	62.29	58.66
GSMUA_Achr7P10770_001	Banana	cytosol	52.91	58.39
TraesCS1D01G346200.1	Wheat	golgi	62.1	58.17
TraesCS1A01G344000.1	Wheat	nucleus	61.91	58.0
Zm00001d038775_P002	Maize	extracellular	62.1	57.57
TraesCS3B01G311900.2	Wheat	cytosol	63.79	53.8
VIT_00s0780g00010.t01	Wine grape	cytosol	45.59	52.48
HORVU1Hr1G075550.1	Barley	plastid	62.1	51.8
HORVU3Hr1G070300.3	Barley	cytosol, plastid	63.41	51.45
Zm00001d043563_P002	Maize	cytosol, extracellular	64.17	44.76
TraesCS3A01G277700.1	Wheat	cytosol	63.79	44.33
TraesCS3D01G278000.1	Wheat	cytosol	63.98	43.94
OQU87495	Sorghum	cytosol	64.17	43.79
VIT_14s0108g00540.t01	Wine grape	cytosol	38.65	42.92
VIT_00s0199g00240.t01	Wine grape	cytosol	35.08	39.7
VIT_00s0199g00220.t01	Wine grape	plastid	36.4	37.16
OQU78332	Sorghum	mitochondrion	62.1	30.39

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	EntrezGene:100242517
wikigene:100242517	MapMan:2.1.1.1.1	Gene3D:3.40.50.450	InterPro:ATP_PFK	ProteinID:CBI38613	ProteinID:CBI38613.3
ncoils:Coil	UniProt:D7U799	EMBL:FN596738	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0006002	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0046872	GO:GO:0061615	EntrezGene:LOC100242517	wikigene:LOC100242517
HAMAP:MF_01981	PFAM:PF00365	PIRSF:PIRSF000534	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697
PANTHER:PTHR13697:SF34	InterPro:Phosphofructokinase_dom	InterPro:PyroP-dep_PFK_TP0108	SUPFAM:SSF53784	UniParc:UPI00015C87E5	ArrayExpress:VIT_16s0013g01140
EnsemblPlantsGene:VIT_16s0013g01140	EnsemblPlants:VIT_16s0013g01140.t01	unigene:Vvi.12610	RefSeq:XP_002282309	RefSeq:XP_002282309.2	SEG:seg

Description

ATP-dependent 6-phosphofructokinase [Source:UniProtKB/TrEMBL;Acc:D7U799]

Coordinates

chr16:-:7085440..7130394

Molecular Weight (calculated)

58550.3 Da

IEP (calculated)

8.297

GRAVY (calculated)

-0.180

Length

533 amino acids

Sequence
(BLAST)

001: MDLSLSSFAR SSIPPPLKSC NLTSLSNFPN YSFKSRNFSL TPLISRQNRR IRAQYSCNSG SGGGGGGDDD GFVVDEVPHL TNFLPDLPSY PNPLQQNLAY
101: TIVKKNFVSP EDVVAQKIVV QKGSPRGVHF RRAGPREKVY FKSEEVRACI VTCGGLCPGI NTVIREIVCG LNYMYGVHDI LGIEGGYRGF YSKNTIQLTP
201: KVVNDIHKRG GTFLRTSRGG HDTDKIVDNI QDRGINQVYI IGGDGTQKGA ALIYKEVEKR GLQVAVAGIP KTIDNDIAVI DKSFGFDTAV EEAQRAINAA
301: HVEVESVENG VGIVKLMGRY SGFIAMFATL ASRDVDCCLI PESPFYLEGQ GGLFEFIEQR LKENGHVVIV LAEGAGQEYV AQSMHAVSEK DASGNRLLLD
401: VGLWLSQKIK DHFTKVQKMA VNMKYIDPTY MIRAIPSNAS DNIYCTLLAH SAVHGAMAGY TGFTIGPVSS RHAYIPIDRV TETTKTIKLT DRMWARLLSS
501: TNQPSFLKGS PVMQERVDKE TIEMIDNMKI TSI

Best Arabidopsis Sequence Match ( AT5G61580.1 )
(BLAST)

001: MEASISFLGS TKPNISLFNP SSNVLPRRDF PLPALKLKKV SVLPRILHQK RLIRAQCSDG FKPEEDDGFV LEDVPHLTKF LPDLPSYPNP LKESQAYAIV
101: KRTFVSSEDV VAQNIVVQKG SKRGVHFRRA GPRERVYFRS DEVKACIVTC GGLCPGINTV IREIVCGLNN MYGVNNILGI QGGYRGFYSK NTMNLTPKVV
201: NDIHKRGGTF LQTSRGGHDT AKIVDNIQDR GINQVYIIGG GGTQKGAEKI YEEVERRGLQ VAVSGIPKTI DNDIAVIDKS FGFDTAVEEA QRAINAAHVE
301: VESVENGVGI VKLMGRYSGF IAMIATLANR DVDCCLIPES PFFLEGKGGL FEFIEERLKE NRHMVIVIAE GAGQDYVAQS MRASETKDAS GNRLLLDVGL
401: WLTQQIKDHF TNVRKMMINM KYIDPTYMIR AIPSNASDNV YCTLLAQSAV HGAMAGYSGF TVGPVNSRHA YIPISQVTEV TNTVKLTDRM WARLLASTNQ
501: PSFLTGEGAL QNVIDMETQE KIDNMKISSI

Arabidopsis Description

PFK4ATP-dependent 6-phosphofructokinase [Source:UniProtKB/TrEMBL;Acc:A0A178UCI3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.