Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G56630.1 | CDY21099 | AT1G13520.1 | 21798944 |
| AT5G56630.1 | CDY21100 | AT1G13520.1 | 21798944 |
| AT5G56630.1 | CDY50165 | AT1G13520.1 | 21798944 |
| AT5G56630.1 | CDY50167 | AT1G13520.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72240 | Canola | cytosol | 22.73 | 35.95 |
| CDY03977 | Canola | cytosol | 23.55 | 32.95 |
| PGSC0003DMT400095815 | Potato | cytosol | 18.18 | 28.21 |
| CDY65216 | Canola | cytosol, mitochondrion | 6.61 | 25.4 |
| CDY32769 | Canola | cytosol | 33.88 | 22.22 |
| CDY32873 | Canola | cytosol | 34.3 | 17.01 |
| CDY69051 | Canola | cytosol | 32.64 | 16.56 |
| AT5G56630.1 | Thale cress | cytosol | 33.06 | 16.49 |
| CDY41800 | Canola | cytosol | 33.06 | 16.49 |
| CDX94352 | Canola | cytosol | 32.64 | 16.16 |
| CDX89351 | Canola | cytosol | 32.64 | 16.16 |
| CDY20715 | Canola | cytosol | 32.64 | 16.12 |
| CDX88580 | Canola | cytosol | 30.99 | 15.46 |
| CDY11911 | Canola | cytosol | 29.75 | 15.06 |
| CDY48604 | Canola | cytosol | 28.1 | 14.38 |
| GSMUA_Achr4P08240_001 | Banana | cytosol | 27.69 | 14.29 |
| GSMUA_Achr1P04940_001 | Banana | cytosol | 28.1 | 14.08 |
| VIT_11s0016g02850.t01 | Wine grape | cytosol | 28.51 | 14.05 |
| CDX68896 | Canola | cytosol | 26.86 | 14.04 |
| CDX75291 | Canola | cytosol | 26.86 | 14.04 |
| CDY06829 | Canola | cytosol | 27.69 | 13.99 |
| GSMUA_Achr2P16600_001 | Banana | cytosol | 27.69 | 13.67 |
| Solyc07g045160.2.1 | Tomato | cytosol | 27.27 | 13.47 |
| GSMUA_Achr7P13640_001 | Banana | cytosol | 26.03 | 12.96 |
| GSMUA_Achr4P01040_001 | Banana | cytosol | 28.93 | 12.92 |
| PGSC0003DMT400044886 | Potato | cytosol | 26.45 | 12.7 |
| KRG92178 | Soybean | cytosol, plastid | 17.36 | 12.65 |
| PGSC0003DMT400070848 | Potato | cytosol | 24.38 | 12.61 |
| Os05t0524400-01 | Rice | nucleus | 29.34 | 12.52 |
| Zm00001d038775_P002 | Maize | extracellular | 28.93 | 12.17 |
| TraesCS1B01G357000.1 | Wheat | cytosol | 27.69 | 11.84 |
| TraesCS1A01G344000.1 | Wheat | nucleus | 27.69 | 11.78 |
| TraesCS1D01G346200.1 | Wheat | golgi | 27.69 | 11.78 |
| Solyc04g072580.1.1 | Tomato | cytosol | 23.97 | 11.62 |
| GSMUA_Achr7P10770_001 | Banana | cytosol | 22.31 | 11.18 |
| CDY17703 | Canola | cytosol | 19.83 | 10.81 |
| CDX77799 | Canola | cytosol | 19.83 | 10.81 |
| CDY02131 | Canola | plastid | 23.55 | 10.71 |
| HORVU1Hr1G075550.1 | Barley | plastid | 28.1 | 10.64 |
| CDY23054 | Canola | plastid | 23.14 | 10.53 |
| TraesCS3B01G311900.2 | Wheat | cytosol | 26.45 | 10.13 |
| HORVU3Hr1G070300.3 | Barley | cytosol, plastid | 26.45 | 9.74 |
| CDY68743 | Canola | cytosol, plastid | 5.37 | 8.84 |
| CDY52512 | Canola | mitochondrion | 18.18 | 8.75 |
| TraesCS3A01G277700.1 | Wheat | cytosol | 26.86 | 8.47 |
| CDX99958 | Canola | plastid | 5.37 | 8.44 |
| CDX90382 | Canola | plastid | 17.77 | 8.4 |
| Zm00001d043563_P002 | Maize | cytosol, extracellular | 26.45 | 8.38 |
| TraesCS3D01G278000.1 | Wheat | cytosol | 26.86 | 8.38 |
| GSMUA_Achr4P15420_001 | Banana | cytosol | 12.4 | 8.31 |
| CDX76918 | Canola | plastid | 18.18 | 8.16 |
| CDY13756 | Canola | plastid | 18.18 | 8.16 |
| OQU87495 | Sorghum | cytosol | 26.03 | 8.07 |
| CDX93710 | Canola | mitochondrion | 4.96 | 7.32 |
| OQU78332 | Sorghum | mitochondrion | 28.93 | 6.43 |
Protein Annotations
| EnsemblPlants:CDY07887 | EnsemblPlantsGene:GSBRNA2T00125069001 | GO:A0A078F482 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR13697 | PANTHER:PTHR13697:SF31 | ProteinID:CDY07887 | ProteinID:CDY07887.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EF31B9 | UniProt:A0A078F482 | MapMan:35.1 | : | : | : |
Description
BnaC03g47350DBnaC03g47350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F482]
Coordinates
chrLK031981:+:856750..858604
Molecular Weight (calculated)
27520.9 Da
IEP (calculated)
6.353
GRAVY (calculated)
-0.105
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MRFESHKLFF VLVCVSLYLL VFFFYFSFSR QVASALSHAG LESSNLIVGI DVTKSNDWTD FRLVSLVITS VSNDNHCINS PGGKVDSWSS LRETDQEAGQ
101: QLMCKSMEFN NDASDKKLII DLGFWLPQSI KSVVHGEMSS GLINGRPTYI PYNRITEKQN SVAITDRMWT RLMSSTNQSS FLDPKDITEE KNEVPEKPHI
201: LTVKTVTDFS IFFELLKRSL SNGTKTLFID LPNQNIYCML FP
101: QLMCKSMEFN NDASDKKLII DLGFWLPQSI KSVVHGEMSS GLINGRPTYI PYNRITEKQN SVAITDRMWT RLMSSTNQSS FLDPKDITEE KNEVPEKPHI
201: LTVKTVTDFS IFFELLKRSL SNGTKTLFID LPNQNIYCML FP
001: MSSPRSNKPK IVNGPGGYIL QDVPHLIDYL PDLPTYPNPL QDNPAYSVVK QYFVHADDSV PEKVVVHKDG PRGVHFRRAG PRQKVYFESD EVHACIVTCG
101: GLCPGLNTVI REVVSSLSYM YGVKRILGID GGYRGFYAKN TIPLNSKVVN DIHKRGGTII GTSRGGHDTN KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRRLKV AVVGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESNENGIGFV KLMGRYSGYI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EFIERRLKDH GHMVIVLAEG AGQDLMCKSM ESTPMDASGN KLLKDVGLWL SQSIKDHFKK NKMVMNLKYI DPTYMIRAVP SNASDNVYCT LLAQSAVHGA
401: MAGYTGYTSG LVNGRQTYIP FYRITETQNN VVITDRMWAR LLSSTNQPSF LGPKDTSEEK KELPETPLLD DGAVDIPPVT KEVTK
101: GLCPGLNTVI REVVSSLSYM YGVKRILGID GGYRGFYAKN TIPLNSKVVN DIHKRGGTII GTSRGGHDTN KIVDSIQDRG INQVYIIGGD GTQRGASVIF
201: EEIRRRRLKV AVVGIPKTID NDIPVIDKSF GFDTAVEEAQ RAINAAHVEA ESNENGIGFV KLMGRYSGYI AMYATLASRD VDCCLIPESP FYLEGEGGLF
301: EFIERRLKDH GHMVIVLAEG AGQDLMCKSM ESTPMDASGN KLLKDVGLWL SQSIKDHFKK NKMVMNLKYI DPTYMIRAVP SNASDNVYCT LLAQSAVHGA
401: MAGYTGYTSG LVNGRQTYIP FYRITETQNN VVITDRMWAR LLSSTNQPSF LGPKDTSEEK KELPETPLLD DGAVDIPPVT KEVTK
Arabidopsis Description
PFK7ATP-dependent 6-phosphofructokinase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5J7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.