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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 4
  • cytosol 2
  • mitochondrion 2
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98253 Canola cytosol 100.0 100.0
CDX67711 Canola cytosol 100.0 100.0
Bra014602.1-P Field mustard cytosol 99.38 99.38
Bra007363.1-P Field mustard cytosol 98.75 98.75
AT3G57870.1 Thale cress cytosol 95.0 95.0
KRH28435 Soybean cytosol 91.25 91.82
KRH77039 Soybean cytosol 91.25 91.82
KRH57897 Soybean nucleus 88.75 88.75
KRH04554 Soybean nucleus 88.75 88.75
Solyc12g088680.1.1 Tomato cytosol 85.0 85.0
PGSC0003DMT400020524 Potato cytosol 85.0 85.0
Solyc04g078620.2.1 Tomato nucleus 85.0 85.0
PGSC0003DMT400039840 Potato mitochondrion 82.5 82.5
Bra014406.1-P Field mustard cytosol 81.25 81.25
Bra030487.1-P Field mustard cytosol, plastid 37.5 34.48
Bra003210.1-P Field mustard nucleus 34.38 32.93
Bra018852.1-P Field mustard cytosol, plastid 36.88 32.6
Bra014751.1-P Field mustard cytosol, nucleus, plastid 33.75 32.34
Bra035819.1-P Field mustard cytosol, plastid 36.25 32.04
Bra014255.1-P Field mustard cytosol 32.5 31.71
Bra038253.1-P Field mustard nucleus 35.62 31.49
Bra020324.1-P Field mustard nucleus 33.12 31.18
Bra002579.1-P Field mustard cytosol 30.62 30.82
Bra007157.1-P Field mustard nucleus 30.62 29.34
Protein Annotations
MapMan:19.2.2.2.3Gene3D:3.10.110.10EnsemblPlantsGene:Bra003301EnsemblPlants:Bra003301.1EnsemblPlants:Bra003301.1-PGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016740GO:GO:0016925GO:GO:0019538GO:GO:0019789
InterPro:IPR000608InterPro:IPR016135UniProt:M4CGG8PFAM:PF00179ScanProsite:PS00183PFscan:PS50127
PANTHER:PTHR43927PANTHER:PTHR43927:SF4SMART:SM00212SUPFAM:SSF54495InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_AS
InterPro:UBQ-conjugating_enzyme/RWDUniParc:UPI0002541618InterPro:Ubc9SEG:seg::
Description
AT3G57870 (E=7e-078) AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE1 (SUMO CONJUGATION ENZYME 1); SUMO ligase
Coordinates
chrA07:-:12486704..12488259
Molecular Weight (calculated)
17844.3 Da
IEP (calculated)
8.477
GRAVY (calculated)
-0.481
Length
160 amino acids
Sequence
(BLAST)
001: MASGIARGRL AEERKSWRKN HPHGFVAKPE TGPDGSVNLM VWHCTIPGKA GTDWEGGFFP LTMHFSEDYP SKPPKCKFPP GFFHPNVYPS GTVCLSILNE
101: DSGWRPAITV KQILVGIQDL LDTPNPADPA QTDGYHLFIQ DAVEYKKRVK LQSKQYPPIV
Best Arabidopsis Sequence Match ( AT3G57870.1 )
(BLAST)
001: MASGIARGRL AEERKSWRKN HPHGFVAKPE TGQDGTVNLM VWHCTIPGKA GTDWEGGFFP LTMHFSEDYP SKPPKCKFPQ GFFHPNVYPS GTVCLSILNE
101: DYGWRPAITV KQILVGIQDL LDTPNPADPA QTDGYHLFCQ DPVEYKKRVK LQSKQYPALV
Arabidopsis Description
SCE1SCE1A [Source:UniProtKB/TrEMBL;Acc:A0A178V9H0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.