Factsheet for Bra014406.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66302	Canola	cytosol	100.0	100.0
CDX93982	Canola	cytosol	99.38	99.38
Os10t0536000-01	Rice	cytosol	85.0	85.0
GSMUA_Achr9P14150_001	Banana	nucleus	85.0	85.0
VIT_07s0031g00160.t01	Wine grape	nucleus	85.62	84.57
Zm00001d048473_P003	Maize	nucleus	84.38	84.38
Zm00001d027427_P001	Maize	nucleus	84.38	84.38
Os03t0123100-01	Rice	cytosol	84.38	84.38
GSMUA_AchrUn_...	Banana	nucleus	84.38	84.38
EER95612	Sorghum	nucleus	84.38	84.38
EER92016	Sorghum	nucleus	83.75	83.75
GSMUA_Achr1P03640_001	Banana	nucleus	83.75	83.75
GSMUA_Achr3P05370_001	Banana	cytosol	83.75	83.75
TraesCS5A01G515400.1	Wheat	cytosol	83.75	83.23
TraesCS4D01G341600.2	Wheat	cytosol	83.75	83.23
TraesCS4B01G346600.2	Wheat	cytosol	83.75	83.23
Solyc03g044260.2.1	Tomato	nucleus	83.12	83.12
Zm00001d047354_P001	Maize	nucleus	83.12	83.12
TraesCS1D01G203200.1	Wheat	nucleus	83.12	82.61
TraesCS1A01G199500.1	Wheat	nucleus	83.12	82.61
Bra014602.1-P	Field mustard	cytosol	81.88	81.88
Bra003301.1-P	Field mustard	cytosol	81.25	81.25
Bra007363.1-P	Field mustard	cytosol	80.62	80.62
Solyc02g093110.2.1	Tomato	nucleus	80.62	80.62
TraesCS1B01G214400.2	Wheat	nucleus	83.12	79.17
Zm00001d029740_P002	Maize	nucleus	78.75	78.75
PGSC0003DMT400016581	Potato	nucleus	78.75	75.0
HORVU1Hr1G051610.3	Barley	nucleus	82.5	74.16
HORVU4Hr1G084760.5	Barley	plastid	83.75	69.43
Bra030487.1-P	Field mustard	cytosol, plastid	36.88	33.91
Bra014255.1-P	Field mustard	cytosol	33.12	32.32
Bra018852.1-P	Field mustard	cytosol, plastid	36.25	32.04
Bra035819.1-P	Field mustard	cytosol, plastid	35.62	31.49
Bra038253.1-P	Field mustard	nucleus	35.0	30.94
Bra003210.1-P	Field mustard	nucleus	30.62	29.34
Bra014751.1-P	Field mustard	cytosol, nucleus, plastid	29.38	28.14
Bra002579.1-P	Field mustard	cytosol	27.5	27.67
Bra020324.1-P	Field mustard	nucleus	29.38	27.65
Bra007157.1-P	Field mustard	nucleus	27.5	26.35

Protein Annotations

MapMan:19.2.2.2.3	Gene3D:3.10.110.10	EnsemblPlantsGene:Bra014406	EnsemblPlants:Bra014406.1	EnsemblPlants:Bra014406.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0016925	GO:GO:0019538	GO:GO:0019789
InterPro:IPR000608	InterPro:IPR016135	UniProt:M4DD38	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127
PANTHER:PTHR43927	PANTHER:PTHR43927:SF4	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS
InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0002543829	InterPro:Ubc9	:	:	:

Description

AT3G57870 (E=6e-081) AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE1 (SUMO CONJUGATION ENZYME 1); SUMO ligase

Coordinates

chrA04:+:353381..354693

Molecular Weight (calculated)

18173.5 Da

IEP (calculated)

8.449

GRAVY (calculated)

-0.712

Length

160 amino acids

Sequence
(BLAST)

001: MSGGIARGRL TEERKAWRKN HPHAFVAKPE TSSDGTNNLM VWQCIIPGKS GTDWEGGFYP LTLNFSEDYP SKPPKCKFPQ GFFHPNVYPS GTVCLSILNE
101: DYGWRPAITV KQILVGIQDL LDEPNPNDPA QTEGYQLFVQ DKNEYKRRVK QQAKQYPTVL

Best Arabidopsis Sequence Match ( AT3G57870.1 )
(BLAST)

001: MASGIARGRL AEERKSWRKN HPHGFVAKPE TGQDGTVNLM VWHCTIPGKA GTDWEGGFFP LTMHFSEDYP SKPPKCKFPQ GFFHPNVYPS GTVCLSILNE
101: DYGWRPAITV KQILVGIQDL LDTPNPADPA QTDGYHLFCQ DPVEYKKRVK LQSKQYPALV

Arabidopsis Description

SCE1SCE1A [Source:UniProtKB/TrEMBL;Acc:A0A178V9H0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.