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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus, plastid

Predictor Summary:
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 2
  • mitochondrion 2
  • cytosol 1
  • nucleus 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76101 Canola cytosol, nucleus, plastid 99.4 99.4
CDY02931 Canola cytosol, nucleus, plastid 98.8 98.8
Bra003210.1-P Field mustard nucleus 95.81 95.81
Bra007157.1-P Field mustard nucleus 89.82 89.82
PGSC0003DMT400060483 Potato cytosol, nucleus, plastid 89.22 87.65
PGSC0003DMT400060478 Potato cytosol, nucleus, plastid 88.02 87.5
Solyc05g054550.2.1 Tomato cytosol, nucleus, plastid 88.02 86.47
VIT_13s0019g00910.t01 Wine grape plastid 86.23 85.71
Solyc05g054540.2.1 Tomato plastid 86.23 84.71
Solyc04g011430.2.1 Tomato cytosol 83.23 84.24
PGSC0003DMT400071311 Potato nucleus 82.63 83.64
GSMUA_Achr6P34220_001 Banana plastid 83.83 83.33
Bra002579.1-P Field mustard cytosol 77.84 81.76
GSMUA_Achr11P... Banana cytosol, nucleus, plastid 82.04 81.55
Bra020324.1-P Field mustard nucleus 82.63 81.18
Os01t0839700-01 Rice cytosol, nucleus, plastid 82.04 81.07
Zm00001d038376_P001 Maize extracellular 80.24 79.29
TraesCS1D01G284200.1 Wheat cytosol, nucleus, plastid 80.24 79.29
Os05t0460200-01 Rice cytosol, nucleus, plastid 80.24 79.29
TraesCS1A01G285200.1 Wheat cytosol, nucleus, plastid 80.24 79.29
TraesCS3D01G351600.1 Wheat cytosol, nucleus, plastid 79.64 78.7
HORVU1Hr1G072200.2 Barley cytosol 79.64 78.7
TraesCS3B01G390400.1 Wheat cytosol, nucleus, plastid 79.64 78.7
TraesCS3A01G357700.1 Wheat cytosol, nucleus, plastid 79.64 78.7
EES03856 Sorghum cytosol, nucleus, plastid 79.04 78.11
Zm00001d012421_P003 Maize cytosol, nucleus, plastid 79.04 78.11
Zm00001d042929_P001 Maize cytosol, nucleus, plastid 78.44 77.51
AT3G55380.2 Thale cress nucleus 91.62 76.12
KXG22164 Sorghum cytosol, nucleus, plastid 73.65 71.51
GSMUA_Achr5P08370_001 Banana cytosol 57.48 70.59
TraesCS1B01G294400.2 Wheat plastid 80.24 67.0
Zm00001d010534_P001 Maize cytosol 80.24 56.54
GSMUA_Achr5P08330_001 Banana extracellular, golgi, vacuole 31.14 54.74
HORVU3Hr1G086540.2 Barley endoplasmic reticulum, golgi, plastid 79.64 52.57
Zm00001d040631_P001 Maize cytosol 55.69 40.97
Bra014602.1-P Field mustard cytosol 32.34 33.75
Bra003301.1-P Field mustard cytosol 32.34 33.75
Bra030487.1-P Field mustard cytosol, plastid 34.73 33.33
Bra007363.1-P Field mustard cytosol 31.74 33.12
Bra038253.1-P Field mustard nucleus 34.73 32.04
Bra018852.1-P Field mustard cytosol, plastid 34.73 32.04
Bra035819.1-P Field mustard cytosol, plastid 34.73 32.04
Bra014255.1-P Field mustard cytosol 31.14 31.71
Bra014406.1-P Field mustard cytosol 28.14 29.38
Zm00001d008383_P001 Maize plastid 26.35 19.13
Zm00001d009034_P002 Maize nucleus 41.92 18.09
Zm00001d029705_P032 Maize plasma membrane 29.34 9.01
Zm00001d005779_P153 Maize plasma membrane 19.76 5.5
Protein Annotations
MapMan:19.2.2.1.6.1.1MapMan:19.2.4.1.2Gene3D:3.10.110.10EnsemblPlantsGene:Bra014751EnsemblPlants:Bra014751.1EnsemblPlants:Bra014751.1-P
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0016740GO:GO:0019538
InterPro:IPR000608InterPro:IPR016135UniProt:M4DE32PFAM:PF00179ScanProsite:PS00183PFscan:PS50127
PANTHER:PTHR24067PANTHER:PTHR24067:SF174SMART:SM00212SUPFAM:SSF54495InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_AS
InterPro:UBQ-conjugating_enzyme/RWDUniParc:UPI0002544B20SEG:seg:::
Description
AT3G55380 (E=2e-079) UBC14 | UBC14 (ubiquitin-conjugating enzyme 14); ubiquitin-protein ligase
Coordinates
chrA04:-:2775651..2776750
Molecular Weight (calculated)
18783.3 Da
IEP (calculated)
6.258
GRAVY (calculated)
-0.471
Length
167 amino acids
Sequence
(BLAST)
001: MAKNQASLLL QKQLKDLCKK PVDGFSAGLV DENNVFQWSV SIMGPPDTLY EGGFFNAIMT FPQDYPNKPP TVKFTSEVWH PNVYSDGKVC ISILHPPGDD
101: PNGYELASER WNPVHTVESI VLSIISMLSG PNDESPANVQ AAKEWRDNRA EFRKKVSRCV RRSQEML
Best Arabidopsis Sequence Match ( AT3G55380.1 )
(BLAST)
001: MANNQASLLL QKQLKDLCKK PVDGFSAGLV DEKNVFQWSV SIMGPPDTLY EGGFFNAIMS FPENYPVSPP TVTFTSEMWH PNVYSDGKVC ISILHPPGDD
101: PHGYELASER WTPVHTVESI VLSIISMLSG PNDESPANVE AAKEWRDNRA EFRKKVSRCV RRSQEML
Arabidopsis Description
UBC14Ubiquitin-conjugating enzyme 14 [Source:UniProtKB/TrEMBL;Acc:F4IWU7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.