Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 2
- mitochondrion 2
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038376_P001 | Maize | extracellular | 84.3 | 85.8 |
| Os05t0460200-01 | Rice | cytosol, nucleus, plastid | 84.3 | 85.8 |
| EES03856 | Sorghum | cytosol, nucleus, plastid | 83.72 | 85.21 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 65.12 | 82.35 |
| TraesCS1D01G284200.1 | Wheat | cytosol, nucleus, plastid | 80.81 | 82.25 |
| TraesCS1A01G285200.1 | Wheat | cytosol, nucleus, plastid | 80.81 | 82.25 |
| HORVU1Hr1G072200.2 | Barley | cytosol | 80.81 | 82.25 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 79.65 | 81.55 |
| VIT_08s0007g00120.t01 | Wine grape | mitochondrion | 78.49 | 80.36 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 78.49 | 80.36 |
| KRH29815 | Soybean | cytosol | 77.33 | 80.12 |
| KRH23052 | Soybean | nucleus | 76.74 | 79.52 |
| KRH10280 | Soybean | nucleus | 76.74 | 79.52 |
| VIT_06s0004g04430.t01 | Wine grape | cytosol, nucleus, plastid | 78.49 | 79.41 |
| KRH24817 | Soybean | cytosol, nucleus, plastid | 76.74 | 79.04 |
| VIT_13s0019g00910.t01 | Wine grape | plastid | 76.16 | 77.98 |
| AT5G59300.1 | Thale cress | nucleus | 75.0 | 77.71 |
| Solyc05g054550.2.1 | Tomato | cytosol, nucleus, plastid | 76.16 | 77.06 |
| PGSC0003DMT400060478 | Potato | cytosol, nucleus, plastid | 75.0 | 76.79 |
| PGSC0003DMT400071311 | Potato | nucleus | 73.26 | 76.36 |
| PGSC0003DMT400060483 | Potato | cytosol, nucleus, plastid | 75.0 | 75.88 |
| Solyc04g011430.2.1 | Tomato | cytosol | 72.67 | 75.76 |
| AT3G46460.1 | Thale cress | cytosol | 72.67 | 75.3 |
| CDY62383 | Canola | nucleus | 72.67 | 74.85 |
| CDY53695 | Canola | nucleus | 72.67 | 74.85 |
| Bra003210.1-P | Field mustard | nucleus | 72.67 | 74.85 |
| CDX76101 | Canola | cytosol, nucleus, plastid | 72.09 | 74.25 |
| CDY02931 | Canola | cytosol, nucleus, plastid | 72.09 | 74.25 |
| CDY02882 | Canola | cytosol, mitochondrion, nucleus | 73.26 | 74.12 |
| Bra014751.1-P | Field mustard | cytosol, nucleus, plastid | 71.51 | 73.65 |
| CDY32651 | Canola | nucleus | 72.67 | 73.53 |
| Bra020324.1-P | Field mustard | nucleus | 72.67 | 73.53 |
| CDY40214 | Canola | nucleus | 70.93 | 73.05 |
| CDY41239 | Canola | nucleus | 70.93 | 73.05 |
| Bra007157.1-P | Field mustard | nucleus | 70.93 | 73.05 |
| Solyc05g054540.2.1 | Tomato | plastid | 72.09 | 72.94 |
| Bra002579.1-P | Field mustard | cytosol | 66.86 | 72.33 |
| Solyc09g009720.1.1 | Tomato | nucleus | 68.6 | 70.66 |
| PGSC0003DMT400023134 | Potato | nucleus | 68.6 | 70.66 |
| CDY33025 | Canola | cytosol | 67.44 | 70.3 |
| TraesCS1B01G294400.2 | Wheat | plastid | 80.81 | 69.5 |
| CDX80292 | Canola | cytosol | 68.02 | 65.36 |
| Zm00001d010534_P001 | Maize | cytosol | 86.05 | 62.45 |
| AT3G55380.2 | Thale cress | nucleus | 70.93 | 60.7 |
| OQU82197 | Sorghum | cytosol | 31.98 | 32.74 |
| EES12706 | Sorghum | mitochondrion | 29.07 | 31.45 |
| EES12705 | Sorghum | mitochondrion | 29.07 | 31.45 |
| EER95612 | Sorghum | nucleus | 28.49 | 30.62 |
| EER92016 | Sorghum | nucleus | 26.74 | 28.75 |
| KXG32249 | Sorghum | plastid | 29.65 | 27.72 |
| OQU80782 | Sorghum | nucleus, plastid | 29.65 | 27.13 |
Protein Annotations
| MapMan:19.2.2.1.6.1.1 | MapMan:19.2.4.1.2 | Gene3D:3.10.110.10 | UniProt:A0A1B6P8V3 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016740 | InterPro:IPR000608 | InterPro:IPR016135 |
| EnsemblPlants:KXG22164 | ProteinID:KXG22164 | ProteinID:KXG22164.1 | PFAM:PF00179 | ScanProsite:PS00183 | PFscan:PS50127 |
| PANTHER:PTHR24067 | PANTHER:PTHR24067:SF237 | MetaCyc:PWY-7511 | SMART:SM00212 | EnsemblPlantsGene:SORBI_3009G164100 | SUPFAM:SSF54495 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0001C805B4 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:+:52051765..52055043
Molecular Weight (calculated)
19072.5 Da
IEP (calculated)
4.697
GRAVY (calculated)
-0.160
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTTSQASL LLQKQLKDLA KNPVDGFSAG LVDDSNVFEW QVTIIGPPDT LYDGGYFNAI MTFPQNYPNS PPSVRFTSEM WHPNVYPDGR VCISILHPPG
101: EDPNGYELAS ERWTPVHTVE SIVLSIISML SSPNDESPAN IEAAVSAHDI ILSFLYRKTN CRSSFVLLRV QR
101: EDPNGYELAS ERWTPVHTVE SIVLSIISML SSPNDESPAN IEAAVSAHDI ILSFLYRKTN CRSSFVLLRV QR
001: MASQASLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFNAIMTF PQNYPNSPPT VRFTSDMWHP NVYSDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
Arabidopsis Description
UBC7Ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:Q42540]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.