Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10280 | Soybean | nucleus | 100.0 | 100.0 |
| KRH29815 | Soybean | cytosol | 97.59 | 97.59 |
| KRH24817 | Soybean | cytosol, nucleus, plastid | 96.99 | 96.41 |
| VIT_06s0004g04430.t01 | Wine grape | cytosol, nucleus, plastid | 93.98 | 91.76 |
| AT5G59300.1 | Thale cress | nucleus | 91.57 | 91.57 |
| AT3G46460.1 | Thale cress | cytosol | 90.36 | 90.36 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 90.36 | 89.29 |
| Zm00001d038376_P001 | Maize | extracellular | 89.76 | 88.17 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 89.16 | 88.1 |
| Bra002579.1-P | Field mustard | cytosol | 83.73 | 87.42 |
| CDY32651 | Canola | nucleus | 88.55 | 86.47 |
| Bra020324.1-P | Field mustard | nucleus | 88.55 | 86.47 |
| CDY02882 | Canola | cytosol, mitochondrion, nucleus | 88.55 | 86.47 |
| Os01t0839700-01 | Rice | cytosol, nucleus, plastid | 87.95 | 86.39 |
| Os05t0460200-01 | Rice | cytosol, nucleus, plastid | 87.95 | 86.39 |
| TraesCS3B01G390400.1 | Wheat | cytosol, nucleus, plastid | 86.75 | 85.21 |
| TraesCS3A01G357700.1 | Wheat | cytosol, nucleus, plastid | 86.75 | 85.21 |
| TraesCS3D01G351600.1 | Wheat | cytosol, nucleus, plastid | 86.75 | 85.21 |
| Zm00001d012421_P003 | Maize | cytosol, nucleus, plastid | 86.75 | 85.21 |
| EES03856 | Sorghum | cytosol, nucleus, plastid | 86.75 | 85.21 |
| CDY33025 | Canola | cytosol | 84.34 | 84.85 |
| TraesCS1D01G284200.1 | Wheat | cytosol, nucleus, plastid | 85.54 | 84.02 |
| TraesCS1A01G285200.1 | Wheat | cytosol, nucleus, plastid | 85.54 | 84.02 |
| Zm00001d042929_P001 | Maize | cytosol, nucleus, plastid | 84.94 | 83.43 |
| HORVU1Hr1G072200.2 | Barley | cytosol | 84.94 | 83.43 |
| PGSC0003DMT400023134 | Potato | nucleus | 83.73 | 83.23 |
| Solyc09g009720.1.1 | Tomato | nucleus | 83.73 | 83.23 |
| CDX80292 | Canola | cytosol | 83.73 | 77.65 |
| KXG22164 | Sorghum | cytosol, nucleus, plastid | 79.52 | 76.74 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 62.65 | 76.47 |
| TraesCS1B01G294400.2 | Wheat | plastid | 85.54 | 71.0 |
| Zm00001d010534_P001 | Maize | cytosol | 86.75 | 60.76 |
| GSMUA_Achr5P08330_001 | Banana | extracellular, golgi, vacuole | 33.73 | 58.95 |
| HORVU3Hr1G086540.2 | Barley | endoplasmic reticulum, golgi, plastid | 86.75 | 56.92 |
| Zm00001d040631_P001 | Maize | cytosol | 59.64 | 43.61 |
| KRH77039 | Soybean | cytosol | 31.93 | 33.33 |
| KRH28435 | Soybean | cytosol | 31.93 | 33.33 |
| KRH04554 | Soybean | nucleus | 30.72 | 31.88 |
| KRH57897 | Soybean | nucleus | 30.72 | 31.88 |
| KRH24100 | Soybean | cytosol, plastid | 33.73 | 31.11 |
| KRH34891 | Soybean | nucleus, plastid | 33.13 | 29.57 |
| KRG91877 | Soybean | cytosol, plastid | 32.53 | 29.03 |
| KRH29075 | Soybean | cytosol, golgi, peroxisome, plastid | 27.71 | 25.41 |
| Zm00001d009034_P002 | Maize | nucleus | 45.78 | 19.64 |
| Zm00001d008383_P001 | Maize | plastid | 26.51 | 19.13 |
| Zm00001d029705_P032 | Maize | plasma membrane | 30.12 | 9.19 |
| Zm00001d005779_P153 | Maize | plasma membrane | 21.69 | 6.0 |
Protein Annotations
| EntrezGene:100500474 | MapMan:19.2.2.1.6.1.1 | MapMan:19.2.4.1.2 | Gene3D:3.10.110.10 | EMBL:ACUP02008453 | EMBL:ACUP02009129 |
| EMBL:BT091407 | UniProt:C6T1V1 | EnsemblPlantsGene:GLYMA_13G334800 | GO:GO:0000166 | GO:GO:0000209 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031625 | GO:GO:0061630 |
| InterPro:IPR000608 | InterPro:IPR016135 | ProteinID:KRH10280.1 | EnsemblPlants:KRH23052 | ProteinID:KRH23052 | ProteinID:KRH23052.1 |
| PFAM:PF00179 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR24067 | PANTHER:PTHR24067:SF237 | MetaCyc:PWY-7511 |
| SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0001B14D9C |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:42840520..42845919
Molecular Weight (calculated)
18611.0 Da
IEP (calculated)
4.818
GRAVY (calculated)
-0.395
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQASLLLQ KQLKDLCKNP VDGFSAGLVD ETNIFEWSVT IIGPPDTLYE GGFFNAIMSF PPNYPNSPPS VKFTSELWHP NVYPDGRVCI SILHPPGDDP
101: NGYELASERW TPVHTVESIV LSIISMLSSP NDESPANVEA AKEWRDRRDE FKKKVSRCVR KSQEML
101: NGYELASERW TPVHTVESIV LSIISMLSSP NDESPANVEA AKEWRDRRDE FKKKVSRCVR KSQEML
001: MNSQACLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFYAIMSF PQNYPNSPPT VRFTSDIWHP NVYPDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWREKRDE FKKKVSRCVR KSQEMF
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWREKRDE FKKKVSRCVR KSQEMF
Arabidopsis Description
UBC13UBC13 [Source:UniProtKB/TrEMBL;Acc:A0A178V960]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.