Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G285200.1 | Wheat | cytosol, nucleus, plastid | 100.0 | 100.0 |
| HORVU1Hr1G072200.2 | Barley | cytosol | 97.63 | 97.63 |
| Zm00001d038376_P001 | Maize | extracellular | 92.31 | 92.31 |
| TraesCS3D01G351600.1 | Wheat | cytosol, nucleus, plastid | 92.31 | 92.31 |
| Os05t0460200-01 | Rice | cytosol, nucleus, plastid | 92.31 | 92.31 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 87.57 | 88.1 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 86.39 | 86.9 |
| VIT_08s0007g00120.t01 | Wine grape | mitochondrion | 85.8 | 86.31 |
| KRH23052 | Soybean | nucleus | 84.02 | 85.54 |
| KRH10280 | Soybean | nucleus | 84.02 | 85.54 |
| VIT_13s0019g00910.t01 | Wine grape | plastid | 84.62 | 85.12 |
| TraesCS1B01G294400.2 | Wheat | plastid | 100.0 | 84.5 |
| KRH24817 | Soybean | cytosol, nucleus, plastid | 83.43 | 84.43 |
| KRH29815 | Soybean | cytosol | 82.84 | 84.34 |
| AT5G59300.1 | Thale cress | nucleus | 82.25 | 83.73 |
| CDY53695 | Canola | nucleus | 81.66 | 82.63 |
| CDY62383 | Canola | nucleus | 81.66 | 82.63 |
| Bra003210.1-P | Field mustard | nucleus | 81.66 | 82.63 |
| PGSC0003DMT400060478 | Potato | cytosol, nucleus, plastid | 81.66 | 82.14 |
| AT3G46460.1 | Thale cress | cytosol | 80.47 | 81.93 |
| Solyc05g054550.2.1 | Tomato | cytosol, nucleus, plastid | 82.25 | 81.76 |
| VIT_06s0004g04430.t01 | Wine grape | cytosol, nucleus, plastid | 81.66 | 81.18 |
| PGSC0003DMT400060483 | Potato | cytosol, nucleus, plastid | 81.66 | 81.18 |
| CDY02931 | Canola | cytosol, nucleus, plastid | 79.88 | 80.84 |
| CDX76101 | Canola | cytosol, nucleus, plastid | 79.88 | 80.84 |
| KXG22164 | Sorghum | cytosol, nucleus, plastid | 82.25 | 80.81 |
| CDY02882 | Canola | cytosol, mitochondrion, nucleus | 81.07 | 80.59 |
| CDY32651 | Canola | nucleus | 81.07 | 80.59 |
| Bra020324.1-P | Field mustard | nucleus | 81.07 | 80.59 |
| Bra002579.1-P | Field mustard | cytosol | 75.74 | 80.5 |
| Bra014751.1-P | Field mustard | cytosol, nucleus, plastid | 79.29 | 80.24 |
| Solyc04g011430.2.1 | Tomato | cytosol | 78.11 | 80.0 |
| CDY40214 | Canola | nucleus | 78.7 | 79.64 |
| Bra007157.1-P | Field mustard | nucleus | 78.7 | 79.64 |
| Solyc09g009720.1.1 | Tomato | nucleus | 78.7 | 79.64 |
| PGSC0003DMT400023134 | Potato | nucleus | 78.7 | 79.64 |
| CDY41239 | Canola | nucleus | 78.7 | 79.64 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 63.91 | 79.41 |
| PGSC0003DMT400071311 | Potato | nucleus | 77.51 | 79.39 |
| CDY33025 | Canola | cytosol | 77.51 | 79.39 |
| Solyc05g054540.2.1 | Tomato | plastid | 79.29 | 78.82 |
| CDX80292 | Canola | cytosol | 76.92 | 72.63 |
| Zm00001d010534_P001 | Maize | cytosol | 91.72 | 65.4 |
| AT3G55380.2 | Thale cress | nucleus | 77.51 | 65.17 |
| TraesCS4D01G341600.2 | Wheat | cytosol | 33.14 | 34.78 |
| TraesCS1D01G203200.1 | Wheat | nucleus | 30.77 | 32.3 |
| TraesCS2D01G393100.2 | Wheat | endoplasmic reticulum | 29.59 | 28.74 |
| TraesCS3D01G190400.2 | Wheat | nucleus, plastid | 31.36 | 27.46 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G284200.1 | EnsemblPlantsGene:TraesCS1D01G284200 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | ncoils:Coil | PANTHER:PTHR24067 | PANTHER:PTHR24067:SF237 | PFAM:PF00179 |
| PFscan:PS50127 | ScanProsite:PS00183 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 |
| MapMan:19.2.2.1.6.1.1 | MapMan:19.2.4.1.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:382632766..382635525
Molecular Weight (calculated)
18887.3 Da
IEP (calculated)
4.810
GRAVY (calculated)
-0.427
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPPSQASL LLQKQLRDLA KNPVDGFSAG LVDDGNVFEW QVTIIGPPET LYDGGYFNAV MTFPQDYPNS PPSVRFTSEM WHPNVYPDGR VCISILHPPG
101: DDPNGYELAS ERWTPVHTVE SIVLSIISML SSPNDESPAN IEAAKDWREK RAEFKKKVRS LVRKSQEML
101: DDPNGYELAS ERWTPVHTVE SIVLSIISML SSPNDESPAN IEAAKDWREK RAEFKKKVRS LVRKSQEML
001: MASQASLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFNAIMTF PQNYPNSPPT VRFTSDMWHP NVYSDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
Arabidopsis Description
UBC7Ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:Q42540]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.