Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002579.1-P | Field mustard | cytosol | 83.8 | 94.34 |
| CDY33025 | Canola | cytosol | 84.92 | 92.12 |
| AT3G46460.1 | Thale cress | cytosol | 83.24 | 89.76 |
| CDY32651 | Canola | nucleus | 81.01 | 85.29 |
| CDY02882 | Canola | cytosol, mitochondrion, nucleus | 81.01 | 85.29 |
| KRH10280 | Soybean | nucleus | 77.65 | 83.73 |
| KRH23052 | Soybean | nucleus | 77.65 | 83.73 |
| KRH24817 | Soybean | cytosol, nucleus, plastid | 77.09 | 82.63 |
| KRH29815 | Soybean | cytosol | 76.54 | 82.53 |
| Os01t0839700-01 | Rice | cytosol, nucleus, plastid | 77.09 | 81.66 |
| CDY62383 | Canola | nucleus | 75.98 | 81.44 |
| CDY53695 | Canola | nucleus | 75.98 | 81.44 |
| TraesCS3A01G357700.1 | Wheat | cytosol, nucleus, plastid | 75.98 | 80.47 |
| TraesCS3B01G390400.1 | Wheat | cytosol, nucleus, plastid | 75.98 | 80.47 |
| TraesCS3D01G351600.1 | Wheat | cytosol, nucleus, plastid | 75.98 | 80.47 |
| Zm00001d012421_P003 | Maize | cytosol, nucleus, plastid | 75.42 | 79.88 |
| Zm00001d038376_P001 | Maize | extracellular | 75.42 | 79.88 |
| EES03856 | Sorghum | cytosol, nucleus, plastid | 75.42 | 79.88 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 74.86 | 79.76 |
| CDY40214 | Canola | nucleus | 74.3 | 79.64 |
| CDY41239 | Canola | nucleus | 74.3 | 79.64 |
| CDY02931 | Canola | cytosol, nucleus, plastid | 73.74 | 79.04 |
| CDX76101 | Canola | cytosol, nucleus, plastid | 73.74 | 79.04 |
| VIT_06s0004g04430.t01 | Wine grape | cytosol, nucleus, plastid | 74.86 | 78.82 |
| Os05t0460200-01 | Rice | cytosol, nucleus, plastid | 74.3 | 78.7 |
| Zm00001d042929_P001 | Maize | cytosol, nucleus, plastid | 74.3 | 78.7 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 72.63 | 77.38 |
| TraesCS1A01G285200.1 | Wheat | cytosol, nucleus, plastid | 72.63 | 76.92 |
| TraesCS1D01G284200.1 | Wheat | cytosol, nucleus, plastid | 72.63 | 76.92 |
| HORVU1Hr1G072200.2 | Barley | cytosol | 72.07 | 76.33 |
| PGSC0003DMT400023134 | Potato | nucleus | 70.39 | 75.45 |
| Solyc09g009720.1.1 | Tomato | nucleus | 70.39 | 75.45 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 53.07 | 69.85 |
| KXG22164 | Sorghum | cytosol, nucleus, plastid | 65.36 | 68.02 |
| TraesCS1B01G294400.2 | Wheat | plastid | 72.63 | 65.0 |
| Zm00001d010534_P001 | Maize | cytosol | 74.3 | 56.12 |
| GSMUA_Achr5P08330_001 | Banana | extracellular, golgi, vacuole | 29.61 | 55.79 |
| HORVU3Hr1G086540.2 | Barley | endoplasmic reticulum, golgi, plastid | 75.98 | 53.75 |
| Zm00001d040631_P001 | Maize | cytosol | 54.19 | 42.73 |
| CDY45063 | Canola | cytosol | 26.26 | 36.72 |
| CDX73361 | Canola | extracellular | 18.44 | 35.87 |
| CDX88967 | Canola | cytosol | 28.49 | 31.88 |
| CDX98253 | Canola | cytosol | 28.49 | 31.88 |
| CDX67711 | Canola | cytosol | 28.49 | 31.88 |
| CDY70581 | Canola | cytosol | 28.49 | 31.88 |
| CDY47661 | Canola | cytosol | 27.93 | 31.25 |
| CDX71988 | Canola | nucleus | 27.37 | 30.62 |
| CDY62105 | Canola | cytosol, plastid | 29.05 | 29.71 |
| CDY29588 | Canola | cytosol, plastid | 29.05 | 29.71 |
| CDX93982 | Canola | cytosol | 26.26 | 29.38 |
| CDY66302 | Canola | cytosol | 26.26 | 29.38 |
| CDY22799 | Canola | cytosol, plastid | 29.05 | 28.73 |
| CDY37132 | Canola | cytosol, plastid | 29.05 | 28.73 |
| CDY42228 | Canola | plastid | 29.05 | 28.73 |
| CDY24563 | Canola | cytosol, nucleus, peroxisome, plastid | 29.05 | 28.57 |
| CDY25375 | Canola | plastid | 29.05 | 28.57 |
| CDY33445 | Canola | nucleus | 28.49 | 28.18 |
| CDY03608 | Canola | nucleus | 16.76 | 25.42 |
| Zm00001d008383_P001 | Maize | plastid | 25.14 | 19.57 |
| Zm00001d009034_P002 | Maize | nucleus | 37.99 | 17.57 |
| Zm00001d029705_P032 | Maize | plasma membrane | 24.58 | 8.09 |
| Zm00001d005779_P153 | Maize | plasma membrane | 16.76 | 5.0 |
Protein Annotations
| MapMan:19.2.2.1.6.1.1 | MapMan:19.2.4.1.2 | Gene3D:3.10.110.10 | GO:A0A078CU45 | EnsemblPlants:CDX80292 | ProteinID:CDX80292 |
| ProteinID:CDX80292.1 | EnsemblPlantsGene:GSBRNA2T00133294001 | InterPro:IPR000608 | InterPro:IPR016135 | PFAM:PF00179 | ScanProsite:PS00183 |
| PFscan:PS50127 | PANTHER:PTHR24067 | PANTHER:PTHR24067:SF237 | MetaCyc:PWY-7511 | SMART:SM00212 | SUPFAM:SSF54495 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniPathway:UPA00143 | UniParc:UPI0004EDD0C7 | SEG:seg |
Description
BnaC09g34500D
Coordinates
chrLK031820:+:1234636..1237039
Molecular Weight (calculated)
20381.1 Da
IEP (calculated)
6.147
GRAVY (calculated)
-0.422
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MITSFEETRP ACRFHSFALH SNSIFWSNLC KHPVDGFSAG LVDEKNIFEW NVTIIGPPDT LYEGGFFNAI MSFPQNYPNS PPTVRFTSDM WHPNVYSDGR
101: VCISILHPPG DDPSGYELAS ERWTPVHTVE SIMLSIISML SGPNDESPAN VEAAKEWREK RHEFKKKVSR CVRKSQEML
101: VCISILHPPG DDPSGYELAS ERWTPVHTVE SIMLSIISML SGPNDESPAN VEAAKEWREK RHEFKKKVSR CVRKSQEML
001: MASQASLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFNAIMTF PQNYPNSPPT VRFTSDMWHP NVYSDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
Arabidopsis Description
UBC7Ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:Q42540]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.