Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- mitochondrion 2
- cytosol 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g009720.1.1 | Tomato | nucleus | 100.0 | 100.0 |
| PGSC0003DMT400060478 | Potato | cytosol, nucleus, plastid | 85.63 | 85.12 |
| KRH23052 | Soybean | nucleus | 83.23 | 83.73 |
| KRH10280 | Soybean | nucleus | 83.23 | 83.73 |
| KRH29815 | Soybean | cytosol | 82.63 | 83.13 |
| PGSC0003DMT400060483 | Potato | cytosol, nucleus, plastid | 84.43 | 82.94 |
| AT5G59300.1 | Thale cress | nucleus | 82.04 | 82.53 |
| KRH24817 | Soybean | cytosol, nucleus, plastid | 82.04 | 82.04 |
| AT3G46460.1 | Thale cress | cytosol | 80.84 | 81.33 |
| PGSC0003DMT400071311 | Potato | nucleus | 79.64 | 80.61 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 80.84 | 80.36 |
| VIT_06s0004g04430.t01 | Wine grape | cytosol, nucleus, plastid | 80.84 | 79.41 |
| TraesCS3D01G351600.1 | Wheat | cytosol, nucleus, plastid | 80.24 | 79.29 |
| TraesCS3A01G357700.1 | Wheat | cytosol, nucleus, plastid | 80.24 | 79.29 |
| TraesCS3B01G390400.1 | Wheat | cytosol, nucleus, plastid | 80.24 | 79.29 |
| Os01t0839700-01 | Rice | cytosol, nucleus, plastid | 80.24 | 79.29 |
| TraesCS1A01G285200.1 | Wheat | cytosol, nucleus, plastid | 79.64 | 78.7 |
| TraesCS1D01G284200.1 | Wheat | cytosol, nucleus, plastid | 79.64 | 78.7 |
| Bra002579.1-P | Field mustard | cytosol | 74.85 | 78.62 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 79.04 | 78.57 |
| Bra020324.1-P | Field mustard | nucleus | 79.64 | 78.24 |
| CDY02882 | Canola | cytosol, mitochondrion, nucleus | 79.64 | 78.24 |
| CDY32651 | Canola | nucleus | 79.64 | 78.24 |
| HORVU1Hr1G072200.2 | Barley | cytosol | 79.04 | 78.11 |
| EES03856 | Sorghum | cytosol, nucleus, plastid | 78.44 | 77.51 |
| Zm00001d038376_P001 | Maize | extracellular | 78.44 | 77.51 |
| Zm00001d012421_P003 | Maize | cytosol, nucleus, plastid | 77.84 | 76.92 |
| Zm00001d042929_P001 | Maize | cytosol, nucleus, plastid | 77.84 | 76.92 |
| Os05t0460200-01 | Rice | cytosol, nucleus, plastid | 77.84 | 76.92 |
| CDY33025 | Canola | cytosol | 75.45 | 76.36 |
| CDX80292 | Canola | cytosol | 75.45 | 70.39 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 56.29 | 69.12 |
| KXG22164 | Sorghum | cytosol, nucleus, plastid | 70.66 | 68.6 |
| TraesCS1B01G294400.2 | Wheat | plastid | 79.64 | 66.5 |
| Zm00001d010534_P001 | Maize | cytosol | 76.65 | 54.01 |
| HORVU3Hr1G086540.2 | Barley | endoplasmic reticulum, golgi, plastid | 80.24 | 52.96 |
| GSMUA_Achr5P08330_001 | Banana | extracellular, golgi, vacuole | 29.94 | 52.63 |
| Zm00001d040631_P001 | Maize | cytosol | 55.69 | 40.97 |
| PGSC0003DMT400020524 | Potato | cytosol | 31.74 | 33.12 |
| PGSC0003DMT400089754 | Potato | nucleus | 11.98 | 32.79 |
| PGSC0003DMT400039840 | Potato | mitochondrion | 30.54 | 31.88 |
| PGSC0003DMT400046775 | Potato | nucleus | 30.54 | 31.68 |
| PGSC0003DMT400080256 | Potato | cytosol, plastid | 32.93 | 30.9 |
| PGSC0003DMT400025497 | Potato | extracellular | 25.15 | 30.43 |
| PGSC0003DMT400016581 | Potato | nucleus | 28.74 | 28.57 |
| PGSC0003DMT400014261 | Potato | nucleus | 11.98 | 21.74 |
| Zm00001d008383_P001 | Maize | plastid | 25.75 | 18.7 |
| Zm00001d009034_P002 | Maize | nucleus | 41.92 | 18.09 |
| Zm00001d029705_P032 | Maize | plasma membrane | 29.34 | 9.01 |
| Zm00001d005779_P153 | Maize | plasma membrane | 21.56 | 6.0 |
Protein Annotations
| EntrezGene:102605351 | MapMan:19.2.2.1.6.1.1 | MapMan:19.2.4.1.2 | Gene3D:3.10.110.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000608 | InterPro:IPR016135 |
| UniProt:M1AHV1 | PFAM:PF00179 | EnsemblPlantsGene:PGSC0003DMG400008958 | PGSC:PGSC0003DMG400008958 | EnsemblPlants:PGSC0003DMT400023134 | ScanProsite:PS00183 |
| PFscan:PS50127 | PANTHER:PTHR24067 | PANTHER:PTHR24067:SF237 | SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000276C6E7 | RefSeq:XP_006341116.1 | SEG:seg | : |
Description
Ubiquitin carrier protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008958]
Coordinates
chr9:-:2868109..2868809
Molecular Weight (calculated)
18803.2 Da
IEP (calculated)
4.984
GRAVY (calculated)
-0.406
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSQAALLL QKQLKDLNRH PVDGFSAGLV DENNVFEWSI SIIGPPETLF DGGFFNATMS FPTDYPNNPP TVKFTTEIWH PNVYSDGRVC ISILHPPGDD
101: PNHYELASER WTPVHTVESI MLSIISMLTS PNDESPANVD AAKEWRDNRA EFVKKVKRCV RKSQEML
101: PNHYELASER WTPVHTVESI MLSIISMLTS PNDESPANVD AAKEWRDNRA EFVKKVKRCV RKSQEML
001: MASQASLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFNAIMTF PQNYPNSPPT VRFTSDMWHP NVYSDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
Arabidopsis Description
UBC7Ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:Q42540]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.