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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
  • mitochondrion 2
  • cytosol 2
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P34220_001 Banana plastid 83.09 67.26
EES03856 Sorghum cytosol, nucleus, plastid 83.09 66.86
Zm00001d042929_P001 Maize cytosol, nucleus, plastid 82.35 66.27
Zm00001d012421_P003 Maize cytosol, nucleus, plastid 82.35 66.27
Os01t0839700-01 Rice cytosol, nucleus, plastid 81.62 65.68
KXG22164 Sorghum cytosol, nucleus, plastid 82.35 65.12
GSMUA_Achr11P... Banana cytosol, nucleus, plastid 80.15 64.88
TraesCS3A01G357700.1 Wheat cytosol, nucleus, plastid 80.15 64.5
Os05t0460200-01 Rice cytosol, nucleus, plastid 80.15 64.5
TraesCS3B01G390400.1 Wheat cytosol, nucleus, plastid 80.15 64.5
TraesCS3D01G351600.1 Wheat cytosol, nucleus, plastid 80.15 64.5
TraesCS1D01G284200.1 Wheat cytosol, nucleus, plastid 79.41 63.91
TraesCS1A01G285200.1 Wheat cytosol, nucleus, plastid 79.41 63.91
Zm00001d038376_P001 Maize extracellular 79.41 63.91
HORVU1Hr1G072200.2 Barley cytosol 78.68 63.31
VIT_08s0007g00120.t01 Wine grape mitochondrion 77.94 63.1
KRH24817 Soybean cytosol, nucleus, plastid 77.21 62.87
KRH29815 Soybean cytosol 76.47 62.65
KRH23052 Soybean nucleus 76.47 62.65
KRH10280 Soybean nucleus 76.47 62.65
AT5G59300.1 Thale cress nucleus 75.0 61.45
PGSC0003DMT400071311 Potato nucleus 74.26 61.21
Solyc04g011430.2.1 Tomato cytosol 73.53 60.61
VIT_06s0004g04430.t01 Wine grape cytosol, nucleus, plastid 75.74 60.59
Solyc05g054550.2.1 Tomato cytosol, nucleus, plastid 75.74 60.59
PGSC0003DMT400060478 Potato cytosol, nucleus, plastid 74.26 60.12
PGSC0003DMT400060483 Potato cytosol, nucleus, plastid 74.26 59.41
Bra003210.1-P Field mustard nucleus 72.79 59.28
CDY62383 Canola nucleus 72.79 59.28
CDY53695 Canola nucleus 72.79 59.28
AT3G46460.1 Thale cress cytosol 72.06 59.04
VIT_13s0019g00910.t01 Wine grape plastid 72.79 58.93
CDY02882 Canola cytosol, mitochondrion, nucleus 72.79 58.24
Bra002579.1-P Field mustard cytosol 67.65 57.86
Bra020324.1-P Field mustard nucleus 72.06 57.65
CDY32651 Canola nucleus 72.06 57.65
CDY33025 Canola cytosol 69.85 57.58
CDY40214 Canola nucleus 70.59 57.48
CDY02931 Canola cytosol, nucleus, plastid 70.59 57.48
CDY41239 Canola nucleus 70.59 57.48
CDX76101 Canola cytosol, nucleus, plastid 70.59 57.48
Bra014751.1-P Field mustard cytosol, nucleus, plastid 70.59 57.48
Bra007157.1-P Field mustard nucleus 70.59 57.48
Solyc05g054540.2.1 Tomato plastid 71.32 57.06
PGSC0003DMT400023134 Potato nucleus 69.12 56.29
Solyc09g009720.1.1 Tomato nucleus 69.12 56.29
TraesCS1B01G294400.2 Wheat plastid 79.41 54.0
CDX80292 Canola cytosol 69.85 53.07
AT3G55380.2 Thale cress nucleus 72.79 49.25
Zm00001d010534_P001 Maize cytosol 79.41 45.57
HORVU3Hr1G086540.2 Barley endoplasmic reticulum, golgi, plastid 80.15 43.08
Zm00001d040631_P001 Maize cytosol 68.38 40.97
GSMUA_Achr3P05370_001 Banana cytosol 30.88 26.25
GSMUA_AchrUn_... Banana nucleus 29.41 25.0
GSMUA_Achr1P03640_001 Banana nucleus 29.41 25.0
GSMUA_Achr9P14150_001 Banana nucleus 27.21 23.12
GSMUA_Achr10P... Banana cytosol 22.06 22.9
GSMUA_Achr3P08740_001 Banana cytosol 27.21 20.33
GSMUA_Achr9P17810_001 Banana cytosol 25.74 18.92
GSMUA_Achr7P22730_001 Banana cytosol 24.26 18.03
Zm00001d008383_P001 Maize plastid 30.15 17.83
Zm00001d009034_P002 Maize nucleus 49.26 17.31
GSMUA_Achr5P08330_001 Banana extracellular, golgi, vacuole 9.56 13.68
Zm00001d029705_P032 Maize plasma membrane 27.21 6.8
Zm00001d005779_P153 Maize plasma membrane 15.44 3.5
Protein Annotations
MapMan:19.2.2.1.6.1.1MapMan:19.2.4.1.2Gene3D:3.10.110.10GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0016740EnsemblPlantsGene:GSMUA_Achr5G08370_001EnsemblPlants:GSMUA_Achr5P08370_001EnsemblPlants:GSMUA_Achr5T08370_001
InterPro:IPR000608InterPro:IPR016135UniProt:M0SWR6PFAM:PF00179ScanProsite:PS00183PFscan:PS50127
PANTHER:PTHR24067PANTHER:PTHR24067:SF237SMART:SM00212SUPFAM:SSF54495InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_AS
InterPro:UBQ-conjugating_enzyme/RWDUniParc:UPI000296DC80SEG:seg:::
Description
Ubiquitin-conjugating enzyme E2 7 [Source:GMGC_GENE;Acc:GSMUA_Achr5G08370_001]
Coordinates
chr5:-:6098577..6099994
Molecular Weight (calculated)
15270.1 Da
IEP (calculated)
4.746
GRAVY (calculated)
-0.166
Length
136 amino acids
Sequence
(BLAST)
001: MAATTQASLL LQKQLRDLMK NPVDGFSAGL VDDSNVFEWN VTIIGPPDTL YDGGYFNAIM SFPSNYPNSP PSVRFTSEMW HPNVYSDGRV CISILHPPGD
101: DPNGYELASE RWTPVHTRVS LITLYIVVFN KLDIYK
Best Arabidopsis Sequence Match ( AT5G59300.1 )
(BLAST)
001: MASQASLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFNAIMTF PQNYPNSPPT VRFTSDMWHP NVYSDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
Arabidopsis Description
UBC7Ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:Q42540]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.