Factsheet for Solyc04g011430.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071311	Potato	nucleus	97.58	97.58
Solyc05g054550.2.1	Tomato	cytosol, nucleus, plastid	92.12	89.41
VIT_13s0019g00910.t01	Wine grape	plastid	90.91	89.29
Solyc05g054540.2.1	Tomato	plastid	89.09	86.47
GSMUA_Achr6P34220_001	Banana	plastid	86.67	85.12
Bra003210.1-P	Field mustard	nucleus	86.06	85.03
CDY62383	Canola	nucleus	86.06	85.03
CDY53695	Canola	nucleus	86.06	85.03
CDY02931	Canola	cytosol, nucleus, plastid	84.85	83.83
CDX76101	Canola	cytosol, nucleus, plastid	84.85	83.83
Os01t0839700-01	Rice	cytosol, nucleus, plastid	85.45	83.43
CDY40214	Canola	nucleus	84.24	83.23
Bra014751.1-P	Field mustard	cytosol, nucleus, plastid	84.24	83.23
Bra007157.1-P	Field mustard	nucleus	84.24	83.23
CDY41239	Canola	nucleus	83.64	82.63
Zm00001d038376_P001	Maize	extracellular	84.24	82.25
TraesCS3D01G351600.1	Wheat	cytosol, nucleus, plastid	84.24	82.25
TraesCS3B01G390400.1	Wheat	cytosol, nucleus, plastid	84.24	82.25
TraesCS3A01G357700.1	Wheat	cytosol, nucleus, plastid	84.24	82.25
Zm00001d042929_P001	Maize	cytosol, nucleus, plastid	83.64	81.66
EES03856	Sorghum	cytosol, nucleus, plastid	83.64	81.66
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	83.03	81.55
Os05t0460200-01	Rice	cytosol, nucleus, plastid	83.03	81.07
Zm00001d012421_P003	Maize	cytosol, nucleus, plastid	83.03	81.07
Solyc09g009720.1.1	Tomato	nucleus	81.21	80.24
TraesCS1D01G284200.1	Wheat	cytosol, nucleus, plastid	80.0	78.11
TraesCS1A01G285200.1	Wheat	cytosol, nucleus, plastid	80.0	78.11
HORVU1Hr1G072200.2	Barley	cytosol	79.39	77.51
GSMUA_Achr5P08370_001	Banana	cytosol	60.61	73.53
KXG22164	Sorghum	cytosol, nucleus, plastid	75.76	72.67
AT3G55380.2	Thale cress	nucleus	84.85	69.65
TraesCS1B01G294400.2	Wheat	plastid	80.0	66.0
Zm00001d010534_P001	Maize	cytosol	83.03	57.81
GSMUA_Achr5P08330_001	Banana	extracellular, golgi, vacuole	32.12	55.79
HORVU3Hr1G086540.2	Barley	endoplasmic reticulum, golgi, plastid	84.24	54.94
Zm00001d040631_P001	Maize	cytosol	57.58	41.85
Solyc12g088680.1.1	Tomato	cytosol	31.52	32.5
Solyc02g093110.2.1	Tomato	nucleus	31.52	32.5
Solyc03g112720.2.1	Tomato	nucleus	29.09	32.21
Solyc03g044260.2.1	Tomato	nucleus	30.91	31.88
Solyc04g078620.2.1	Tomato	nucleus	30.3	31.25
Solyc11g065190.1.1	Tomato	plastid	33.33	30.39
Solyc07g021660.1.1	Tomato	extracellular	22.42	26.81
Solyc07g021670.1.1	Tomato	cytosol, mitochondrion	8.48	23.33
Zm00001d008383_P001	Maize	plastid	27.27	19.57
Zm00001d009034_P002	Maize	nucleus	43.03	18.35
Zm00001d029705_P032	Maize	plasma membrane	29.09	8.82
Zm00001d005779_P153	Maize	plasma membrane	20.0	5.5

Protein Annotations

MapMan:19.2.2.1.6.1.1	MapMan:19.2.4.1.2	Gene3D:3.10.110.10	GO:GO:0000166	GO:GO:0000209	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0031625	GO:GO:0061630
InterPro:IPR000608	InterPro:IPR016135	UniProt:K4BPJ6	EMBL:KY246908	PFAM:PF00179	ScanProsite:PS00183
PFscan:PS50127	PANTHER:PTHR24067	PANTHER:PTHR24067:SF237	SMART:SM00212	SUPFAM:SSF54495	EnsemblPlantsGene:Solyc04g011430.2
EnsemblPlants:Solyc04g011430.2.1	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0002765FDF	SEG:seg

Description

UBC14 [Source:UniProtKB/TrEMBL;Acc:K4BPJ6]

Coordinates

chr4:-:3885139..3888726

Molecular Weight (calculated)

18646.9 Da

IEP (calculated)

4.848

GRAVY (calculated)

-0.462

Length

165 amino acids

Sequence
(BLAST)

001: MASQASLLLQ KQLKDLCKHP VDGFSAGLVD ESNLFEWSVT IIGPQDTLYE GGFFNAIMSF PENYPNSPPT VRFTTEIWHP NVYSDGKVCI SILHPPGDDP
101: NGYECANERW SPVHTVESII LSIISMLSSP NDESPANVEA AKEWREKRDE FKKRVSRCVR RSQEM

Best Arabidopsis Sequence Match ( AT5G59300.1 )
(BLAST)

001: MASQASLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFNAIMTF PQNYPNSPPT VRFTSDMWHP NVYSDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF

Arabidopsis Description

UBC7Ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:Q42540]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.