Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03856 | Sorghum | cytosol, nucleus, plastid | 98.22 | 98.22 |
| Os01t0839700-01 | Rice | cytosol, nucleus, plastid | 93.49 | 93.49 |
| Zm00001d042929_P001 | Maize | cytosol, nucleus, plastid | 93.49 | 93.49 |
| TraesCS3D01G351600.1 | Wheat | cytosol, nucleus, plastid | 92.31 | 92.31 |
| TraesCS3B01G390400.1 | Wheat | cytosol, nucleus, plastid | 92.31 | 92.31 |
| TraesCS3A01G357700.1 | Wheat | cytosol, nucleus, plastid | 92.31 | 92.31 |
| Zm00001d038376_P001 | Maize | extracellular | 91.12 | 91.12 |
| VIT_08s0007g00120.t01 | Wine grape | mitochondrion | 89.94 | 90.48 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 88.76 | 89.29 |
| KRH29815 | Soybean | cytosol | 86.39 | 87.95 |
| KRH24817 | Soybean | cytosol, nucleus, plastid | 86.39 | 87.43 |
| KRH23052 | Soybean | nucleus | 85.21 | 86.75 |
| KRH10280 | Soybean | nucleus | 85.21 | 86.75 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 85.8 | 86.31 |
| VIT_06s0004g04430.t01 | Wine grape | cytosol, nucleus, plastid | 86.39 | 85.88 |
| AT5G59300.1 | Thale cress | nucleus | 84.02 | 85.54 |
| AT3G46460.1 | Thale cress | cytosol | 83.43 | 84.94 |
| VIT_13s0019g00910.t01 | Wine grape | plastid | 82.84 | 83.33 |
| Solyc04g011430.2.1 | Tomato | cytosol | 81.07 | 83.03 |
| Solyc05g054550.2.1 | Tomato | cytosol, nucleus, plastid | 83.43 | 82.94 |
| PGSC0003DMT400060478 | Potato | cytosol, nucleus, plastid | 82.25 | 82.74 |
| PGSC0003DMT400071311 | Potato | nucleus | 80.47 | 82.42 |
| Bra002579.1-P | Field mustard | cytosol | 77.51 | 82.39 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 66.27 | 82.35 |
| CDY62383 | Canola | nucleus | 81.07 | 82.04 |
| Bra003210.1-P | Field mustard | nucleus | 81.07 | 82.04 |
| CDY53695 | Canola | nucleus | 81.07 | 82.04 |
| PGSC0003DMT400060483 | Potato | cytosol, nucleus, plastid | 82.25 | 81.76 |
| CDY33025 | Canola | cytosol | 79.29 | 81.21 |
| CDY32651 | Canola | nucleus | 81.66 | 81.18 |
| CDY02882 | Canola | cytosol, mitochondrion, nucleus | 81.66 | 81.18 |
| Bra020324.1-P | Field mustard | nucleus | 81.66 | 81.18 |
| CDY02931 | Canola | cytosol, nucleus, plastid | 78.7 | 79.64 |
| Bra007157.1-P | Field mustard | nucleus | 78.7 | 79.64 |
| CDX76101 | Canola | cytosol, nucleus, plastid | 78.7 | 79.64 |
| CDY40214 | Canola | nucleus | 78.7 | 79.64 |
| CDY41239 | Canola | nucleus | 78.7 | 79.64 |
| Solyc05g054540.2.1 | Tomato | plastid | 79.88 | 79.41 |
| Bra014751.1-P | Field mustard | cytosol, nucleus, plastid | 78.11 | 79.04 |
| Solyc09g009720.1.1 | Tomato | nucleus | 76.92 | 77.84 |
| PGSC0003DMT400023134 | Potato | nucleus | 76.92 | 77.84 |
| CDX80292 | Canola | cytosol | 79.88 | 75.42 |
| AT3G55380.2 | Thale cress | nucleus | 78.7 | 66.17 |
| Zm00001d010534_P001 | Maize | cytosol | 90.53 | 64.56 |
| HORVU3Hr1G086540.2 | Barley | endoplasmic reticulum, golgi, plastid | 92.31 | 61.66 |
| Zm00001d040631_P001 | Maize | cytosol | 64.5 | 48.02 |
| Zm00001d027427_P001 | Maize | nucleus | 31.95 | 33.75 |
| Zm00001d047354_P001 | Maize | nucleus | 30.77 | 32.5 |
| Zm00001d048473_P003 | Maize | nucleus | 30.77 | 32.5 |
| Zm00001d002570_P001 | Maize | mitochondrion, nucleus | 28.99 | 30.82 |
| Zm00001d029740_P002 | Maize | nucleus | 28.4 | 30.0 |
| Zm00001d008260_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 31.95 | 29.51 |
| Zm00001d009034_P002 | Maize | nucleus | 47.93 | 20.93 |
| Zm00001d008383_P001 | Maize | plastid | 28.4 | 20.87 |
| Zm00001d008261_P003 | Maize | nucleus | 26.63 | 17.72 |
| Zm00001d002572_P002 | Maize | cytosol, golgi, mitochondrion, nucleus | 31.95 | 16.67 |
| Zm00001d029705_P032 | Maize | plasma membrane | 29.59 | 9.19 |
| Zm00001d005779_P153 | Maize | plasma membrane | 21.3 | 6.0 |
Protein Annotations
| MapMan:19.2.2.1.6.1.1 | MapMan:19.2.4.1.2 | Gene3D:3.10.110.10 | EntrezGene:541984 | EMBL:AJ002959 | ProteinID:AQK99512.1 |
| ProteinID:AQK99513.1 | ProteinID:AQK99515.1 | ProteinID:AQK99516.1 | EMBL:BT038244 | ncoils:Coil | EMBL:EU966858 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016740 |
| InterPro:IPR000608 | InterPro:IPR016135 | UniProt:O24560 | PFAM:PF00179 | ScanProsite:PS00183 | PFscan:PS50127 |
| PANTHER:PTHR24067 | PANTHER:PTHR24067:SF237 | SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS |
| InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI00000A5953 | EnsemblPlantsGene:Zm00001d012421 | EnsemblPlants:Zm00001d012421_P003 | EnsemblPlants:Zm00001d012421_T003 | SEG:seg |
Description
ubiquitin carrier protein 7
Coordinates
chr8:+:174231537..174235465
Molecular Weight (calculated)
19152.6 Da
IEP (calculated)
4.998
GRAVY (calculated)
-0.482
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTTTQASL LLQKQLRDLA KHPVDGFSAG LVDDSNVFEW QVTIIGPPDT LYDGGYFNAI MSFPQNYPNS PPSVRFTSEM WHPNVYPDGR VCISILHPPG
101: EDPNGYELAS ERWTPVHTVE SIVLSIISML SSPNDESPAN IEAAKEWREQ REDFKKKVRR IVRKSQEMF
101: EDPNGYELAS ERWTPVHTVE SIVLSIISML SSPNDESPAN IEAAKEWREQ REDFKKKVRR IVRKSQEMF
001: MASQASLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFNAIMTF PQNYPNSPPT VRFTSDMWHP NVYSDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
Arabidopsis Description
UBC7Ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:Q42540]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.