Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- nucleus 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009034_P002 | Maize | nucleus | 59.01 | 82.95 |
| Zm00001d005779_P153 | Maize | plasma membrane | 45.77 | 41.5 |
| Zm00001d040631_P001 | Maize | cytosol | 15.07 | 36.12 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 9.93 | 32.14 |
| KRH24817 | Soybean | cytosol, nucleus, plastid | 9.74 | 31.74 |
| KRH29815 | Soybean | cytosol | 9.56 | 31.33 |
| Bra007157.1-P | Field mustard | nucleus | 9.56 | 31.14 |
| CDY40214 | Canola | nucleus | 9.56 | 31.14 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 9.56 | 30.95 |
| TraesCS3B01G390400.1 | Wheat | cytosol, nucleus, plastid | 9.56 | 30.77 |
| TraesCS3A01G357700.1 | Wheat | cytosol, nucleus, plastid | 9.56 | 30.77 |
| TraesCS3D01G351600.1 | Wheat | cytosol, nucleus, plastid | 9.56 | 30.77 |
| VIT_06s0004g04430.t01 | Wine grape | cytosol, nucleus, plastid | 9.56 | 30.59 |
| PGSC0003DMT400060478 | Potato | cytosol, nucleus, plastid | 9.38 | 30.36 |
| VIT_08s0007g00120.t01 | Wine grape | mitochondrion | 9.38 | 30.36 |
| VIT_13s0019g00910.t01 | Wine grape | plastid | 9.38 | 30.36 |
| Zm00001d038376_P001 | Maize | extracellular | 9.38 | 30.18 |
| EES03856 | Sorghum | cytosol, nucleus, plastid | 9.38 | 30.18 |
| KRH23052 | Soybean | nucleus | 9.19 | 30.12 |
| KRH10280 | Soybean | nucleus | 9.19 | 30.12 |
| PGSC0003DMT400060483 | Potato | cytosol, nucleus, plastid | 9.38 | 30.0 |
| CDY41239 | Canola | nucleus | 9.19 | 29.94 |
| Zm00001d042929_P001 | Maize | cytosol, nucleus, plastid | 9.19 | 29.59 |
| Zm00001d012421_P003 | Maize | cytosol, nucleus, plastid | 9.19 | 29.59 |
| Os01t0839700-01 | Rice | cytosol, nucleus, plastid | 9.19 | 29.59 |
| Solyc05g054550.2.1 | Tomato | cytosol, nucleus, plastid | 9.19 | 29.41 |
| PGSC0003DMT400023134 | Potato | nucleus | 9.01 | 29.34 |
| Solyc09g009720.1.1 | Tomato | nucleus | 9.01 | 29.34 |
| CDX76101 | Canola | cytosol, nucleus, plastid | 9.01 | 29.34 |
| CDY02931 | Canola | cytosol, nucleus, plastid | 9.01 | 29.34 |
| Bra014751.1-P | Field mustard | cytosol, nucleus, plastid | 9.01 | 29.34 |
| Bra003210.1-P | Field mustard | nucleus | 9.01 | 29.34 |
| CDY53695 | Canola | nucleus | 9.01 | 29.34 |
| CDY62383 | Canola | nucleus | 9.01 | 29.34 |
| PGSC0003DMT400071311 | Potato | nucleus | 8.82 | 29.09 |
| Solyc04g011430.2.1 | Tomato | cytosol | 8.82 | 29.09 |
| Solyc05g054540.2.1 | Tomato | plastid | 9.01 | 28.82 |
| AT3G46460.1 | Thale cress | cytosol | 8.64 | 28.31 |
| CDY33025 | Canola | cytosol | 8.46 | 27.88 |
| AT5G59300.1 | Thale cress | nucleus | 8.46 | 27.71 |
| Bra002579.1-P | Field mustard | cytosol | 8.09 | 27.67 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 6.8 | 27.21 |
| CDY02882 | Canola | cytosol, mitochondrion, nucleus | 8.46 | 27.06 |
| Bra020324.1-P | Field mustard | nucleus | 8.46 | 27.06 |
| CDY32651 | Canola | nucleus | 8.46 | 27.06 |
| Zm00001d048473_P003 | Maize | nucleus | 7.35 | 25.0 |
| AT3G55380.2 | Thale cress | nucleus | 9.19 | 24.88 |
| CDX80292 | Canola | cytosol | 8.09 | 24.58 |
| Zm00001d027427_P001 | Maize | nucleus | 7.17 | 24.38 |
| Zm00001d047354_P001 | Maize | nucleus | 7.17 | 24.38 |
| Zm00001d002570_P001 | Maize | mitochondrion, nucleus | 6.99 | 23.9 |
| Zm00001d029740_P002 | Maize | nucleus | 6.99 | 23.75 |
| Zm00001d010534_P001 | Maize | cytosol | 9.56 | 21.94 |
| HORVU3Hr1G086540.2 | Barley | endoplasmic reticulum, golgi, plastid | 9.74 | 20.95 |
| Zm00001d008260_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 6.8 | 20.22 |
| Zm00001d008383_P001 | Maize | plastid | 6.62 | 15.65 |
| Zm00001d008261_P003 | Maize | nucleus | 6.62 | 14.17 |
| Zm00001d002572_P002 | Maize | cytosol, golgi, mitochondrion, nucleus | 7.35 | 12.35 |
Protein Annotations
| KEGG:00230+2.7.7.7 | KEGG:00240+2.7.7.7 | Gene3D:1.10.150.20 | EntrezGene:100217074 | Gene3D:3.30.70.370 | MapMan:35.1 |
| UniProt:A0A1D6K782 | InterPro:DNA-dir_DNA_pol_A_palm_dom | InterPro:DNA_polymerase_A | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003824 | GO:GO:0003887 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006260 | GO:GO:0006261 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0071897 | ProteinID:ONL99419.1 | PFAM:PF00476 |
| PANTHER:PTHR10133 | PANTHER:PTHR10133:SF50 | SUPFAM:SSF56672 | TMHMM:TMhelix | UniParc:UPI000844E331 | EnsemblPlantsGene:Zm00001d029705 |
| EnsemblPlants:Zm00001d029705_P032 | EnsemblPlants:Zm00001d029705_T032 | SEG:seg | : | : | : |
Description
ubiquitin carrier protein 7
Coordinates
chr1:+:83199790..83208877
Molecular Weight (calculated)
60474.7 Da
IEP (calculated)
8.450
GRAVY (calculated)
-0.313
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPSDLVTPC VAVPVMDAAL LAVIVPPRRS IHARHGWCSH AMWRGEVTAG AAEVEGEGED EGTGKRVHRG GRSRGTLGDP GAWFLGSAAF AAVGFAEPEP
101: PEMTVDELKL QARASGGHDL RTSSPSACAC SPSTMTRPAS SDNNGTGNHD LELLREKKDQ FDLVISNVHM LDMDGFKLLK LVGLEMDLPG ITRHQSDLPL
201: KCGIQMLCFL TSCIIFEETP VYPDGWVCIS ILHPPSEDPN GYELARYFHH FWYGSVCNVP GIIILFLVWI WNGLGSTTMM RQSCSKDWMI SIPLLPIRLG
301: SPSPLCPTGT KQPMELEQPM DDFHSPAANS LNCFDPSTQS ACTQPVVAAN SDRVRKPEGR GAWLTRNGRQ DTTGGSLQPH AWWPVWEGAH CSSSDDFRNF
401: SGQGKGNDRK VRRVRGVQIR MRAEKRSRKI FVKEAKDTPK LWYSNRKKVL AWQVKQKQLA HEKCEFYTLL WRSRRVLNMA HATRRFLNMA HATFGQRGHI
501: KHAAINAPVQ GTAADVAMCA MLEIDRNTRL KELGWALLMW VVYA
101: PEMTVDELKL QARASGGHDL RTSSPSACAC SPSTMTRPAS SDNNGTGNHD LELLREKKDQ FDLVISNVHM LDMDGFKLLK LVGLEMDLPG ITRHQSDLPL
201: KCGIQMLCFL TSCIIFEETP VYPDGWVCIS ILHPPSEDPN GYELARYFHH FWYGSVCNVP GIIILFLVWI WNGLGSTTMM RQSCSKDWMI SIPLLPIRLG
301: SPSPLCPTGT KQPMELEQPM DDFHSPAANS LNCFDPSTQS ACTQPVVAAN SDRVRKPEGR GAWLTRNGRQ DTTGGSLQPH AWWPVWEGAH CSSSDDFRNF
401: SGQGKGNDRK VRRVRGVQIR MRAEKRSRKI FVKEAKDTPK LWYSNRKKVL AWQVKQKQLA HEKCEFYTLL WRSRRVLNMA HATRRFLNMA HATFGQRGHI
501: KHAAINAPVQ GTAADVAMCA MLEIDRNTRL KELGWALLMW VVYA
0001: MGVSLRHLSP SSFWVSRRPR VSSSILSFLV PRRRILCTRK VAIIKGNAGY STATDCGGSH GFHHSGHQRS SSVEFSGEWK LNLGSKTARM VPPTVKQAGA
0101: VSAWREEVNN KLRGRNREYA NNQDDAFGNG SYILKGFVPK IDDVHSYGNG QNFDYNLKPG TDITTLGREL NGFMQTNSIR GSVVALPSKD IEVGETTDVT
0201: LKPLNSDTTL DNASYKKTAT ISKVEKCTNL SQVRANLKKI YNRVRVVDNV SSAKETVALL MNQYRNLVHA CDTEVSRIDV KTETPVDHGE MICFSIYCGS
0301: EADFGDGKSC IWVDVLGENG RDILAEFKPF FEDSSIKKVW HNYSFDNHII RNYGIKLSGF HGDTMHMARL WDSSRRISGG YSLEALTSDP KVLGGTETKE
0401: EAELFGKISM KKIFGKGKLK KDGSEGKLVI IPPVKELQME DREAWISYSA LDSISTLKLY ESMKKQLQAK KWFLDGKLIS KKNMFDFYQE YWQPFGELLA
0501: KMESEGMLVD RDYLAQIEIV AKAEQEIAVS RFRNWASKHC PDAKHMNVGS DTQLRQLFFG GISNSCNDED LPYEKLFKVP NVDKVIEEGK KRATKFRNIK
0601: LHRISDRPLP TEKFTASGWP SVSGDTLKAL AGKVSAEYDY MEGVLDTCLE ENIGDDDCIS LPDEVVETQH VNTSVESDTS AYGTAFDAFG GGESGKEACH
0701: AIAALCEVCS IDSLISNFIL PLQGSNVSGK DGRVHCSLNI NTETGRLSAR RPNLQNQPAL EKDRYKIRQA FIASPGNSLI VADYGQLELR ILAHLASCES
0801: MKEAFIAGGD FHSRTAMNMY PHIREAVENG EVLLEWHPQP GQEKPPVPLL KDAFASERRK AKMLNFSIAY GKTAIGLSRD WKVSREEAQD TVNLWYNDRQ
0901: EVRKWQELRK KEAIQKGYVL TLLGRARKFP EYRSRAQKNH IERAAINTPV QGSAADVAMC AMLEISNNQR LKELGWKLLL QVHDEVILEG PSESAENAKD
1001: IVVNCMSEPF NGKNILSVDL SVDAKCAQNW YAGK
0101: VSAWREEVNN KLRGRNREYA NNQDDAFGNG SYILKGFVPK IDDVHSYGNG QNFDYNLKPG TDITTLGREL NGFMQTNSIR GSVVALPSKD IEVGETTDVT
0201: LKPLNSDTTL DNASYKKTAT ISKVEKCTNL SQVRANLKKI YNRVRVVDNV SSAKETVALL MNQYRNLVHA CDTEVSRIDV KTETPVDHGE MICFSIYCGS
0301: EADFGDGKSC IWVDVLGENG RDILAEFKPF FEDSSIKKVW HNYSFDNHII RNYGIKLSGF HGDTMHMARL WDSSRRISGG YSLEALTSDP KVLGGTETKE
0401: EAELFGKISM KKIFGKGKLK KDGSEGKLVI IPPVKELQME DREAWISYSA LDSISTLKLY ESMKKQLQAK KWFLDGKLIS KKNMFDFYQE YWQPFGELLA
0501: KMESEGMLVD RDYLAQIEIV AKAEQEIAVS RFRNWASKHC PDAKHMNVGS DTQLRQLFFG GISNSCNDED LPYEKLFKVP NVDKVIEEGK KRATKFRNIK
0601: LHRISDRPLP TEKFTASGWP SVSGDTLKAL AGKVSAEYDY MEGVLDTCLE ENIGDDDCIS LPDEVVETQH VNTSVESDTS AYGTAFDAFG GGESGKEACH
0701: AIAALCEVCS IDSLISNFIL PLQGSNVSGK DGRVHCSLNI NTETGRLSAR RPNLQNQPAL EKDRYKIRQA FIASPGNSLI VADYGQLELR ILAHLASCES
0801: MKEAFIAGGD FHSRTAMNMY PHIREAVENG EVLLEWHPQP GQEKPPVPLL KDAFASERRK AKMLNFSIAY GKTAIGLSRD WKVSREEAQD TVNLWYNDRQ
0901: EVRKWQELRK KEAIQKGYVL TLLGRARKFP EYRSRAQKNH IERAAINTPV QGSAADVAMC AMLEISNNQR LKELGWKLLL QVHDEVILEG PSESAENAKD
1001: IVVNCMSEPF NGKNILSVDL SVDAKCAQNW YAGK
Arabidopsis Description
POLGAMMA1Polymerase gamma 1 [Source:UniProtKB/TrEMBL;Acc:F4JEQ3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.