Factsheet for Zm00001d040631_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P08370_001	Banana	cytosol	40.97	68.38
Zm00001d012421_P003	Maize	cytosol, nucleus, plastid	48.02	64.5
EES03856	Sorghum	cytosol, nucleus, plastid	48.02	64.5
Os01t0839700-01	Rice	cytosol, nucleus, plastid	47.14	63.31
TraesCS3D01G351600.1	Wheat	cytosol, nucleus, plastid	46.7	62.72
TraesCS3B01G390400.1	Wheat	cytosol, nucleus, plastid	46.7	62.72
TraesCS3A01G357700.1	Wheat	cytosol, nucleus, plastid	46.7	62.72
Zm00001d042929_P001	Maize	cytosol, nucleus, plastid	46.26	62.13
Zm00001d038376_P001	Maize	extracellular	46.26	62.13
GSMUA_Achr6P34220_001	Banana	plastid	45.81	61.9
Bra002579.1-P	Field mustard	cytosol	43.17	61.64
VIT_08s0007g00120.t01	Wine grape	mitochondrion	45.37	61.31
KRH29815	Soybean	cytosol	44.05	60.24
KRH24817	Soybean	cytosol, nucleus, plastid	44.05	59.88
KRH23052	Soybean	nucleus	43.61	59.64
KRH10280	Soybean	nucleus	43.61	59.64
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	44.05	59.52
CDY33025	Canola	cytosol	43.17	59.39
AT3G46460.1	Thale cress	cytosol	43.17	59.04
AT5G59300.1	Thale cress	nucleus	43.17	59.04
PGSC0003DMT400060478	Potato	cytosol, nucleus, plastid	43.61	58.93
PGSC0003DMT400060483	Potato	cytosol, nucleus, plastid	44.05	58.82
Solyc05g054550.2.1	Tomato	cytosol, nucleus, plastid	44.05	58.82
VIT_13s0019g00910.t01	Wine grape	plastid	43.17	58.33
VIT_06s0004g04430.t01	Wine grape	cytosol, nucleus, plastid	43.61	58.24
Solyc05g054540.2.1	Tomato	plastid	43.61	58.24
PGSC0003DMT400071311	Potato	nucleus	42.29	58.18
Solyc04g011430.2.1	Tomato	cytosol	41.85	57.58
CDY41239	Canola	nucleus	42.29	57.48
CDY40214	Canola	nucleus	42.29	57.48
Bra007157.1-P	Field mustard	nucleus	42.29	57.48
CDY62383	Canola	nucleus	41.85	56.89
CDY53695	Canola	nucleus	41.85	56.89
Bra003210.1-P	Field mustard	nucleus	41.85	56.89
CDX76101	Canola	cytosol, nucleus, plastid	40.97	55.69
CDY02931	Canola	cytosol, nucleus, plastid	40.97	55.69
Solyc09g009720.1.1	Tomato	nucleus	40.97	55.69
PGSC0003DMT400023134	Potato	nucleus	40.97	55.69
Bra014751.1-P	Field mustard	cytosol, nucleus, plastid	40.97	55.69
CDY32651	Canola	nucleus	41.41	55.29
Bra020324.1-P	Field mustard	nucleus	41.41	55.29
CDY02882	Canola	cytosol, mitochondrion, nucleus	41.41	55.29
CDX80292	Canola	cytosol	42.73	54.19
AT3G55380.2	Thale cress	nucleus	42.29	47.76
Zm00001d010534_P001	Maize	cytosol	45.81	43.88
HORVU3Hr1G086540.2	Barley	endoplasmic reticulum, golgi, plastid	46.7	41.9
Zm00001d027427_P001	Maize	nucleus	21.59	30.62
Zm00001d048473_P003	Maize	nucleus	21.15	30.0
Zm00001d047354_P001	Maize	nucleus	20.7	29.38
Zm00001d029740_P002	Maize	nucleus	18.94	26.88
Zm00001d002570_P001	Maize	mitochondrion, nucleus	18.5	26.42
Zm00001d008260_P001	Maize	cytosol, mitochondrion, nucleus, plastid	19.38	24.04
Zm00001d009034_P002	Maize	nucleus	33.48	19.64
Zm00001d008383_P001	Maize	plastid	19.38	19.13
Zm00001d008261_P003	Maize	nucleus	18.5	16.54
Zm00001d029705_P032	Maize	plasma membrane	36.12	15.07
Zm00001d002572_P002	Maize	cytosol, golgi, mitochondrion, nucleus	19.82	13.89
Zm00001d005779_P153	Maize	plasma membrane	27.31	10.33

Protein Annotations

MapMan:19.2.2.1.6.1.1	MapMan:19.2.4.1.2	Gene3D:3.10.110.10	UniProt:A0A1D6MRU8	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	InterPro:IPR000608	InterPro:IPR016135	ProteinID:ONM31697.1	PFAM:PF00179	ScanProsite:PS00183
PFscan:PS50127	PANTHER:PTHR24067	PANTHER:PTHR24067:SF237	SMART:SM00212	SUPFAM:SSF54495	TMHMM:TMhelix
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0008434C79	EnsemblPlantsGene:Zm00001d040631	EnsemblPlants:Zm00001d040631_P001
EnsemblPlants:Zm00001d040631_T001	:	:	:	:	:

Description

ubiquitin carrier protein 7

Coordinates

chr3:-:55272887..55275303

Molecular Weight (calculated)

25449.1 Da

IEP (calculated)

5.213

GRAVY (calculated)

-0.312

Length

227 amino acids

Sequence
(BLAST)

001: MVVGADLSKH PVDGFSTGLV DDSNVFEWQV TIIGPPDTLY DGGYFNAIMS FPQNYPNNPP SVRFTSEMWH PNVYPDGWVC ISILHPPGED PNGYELASER
101: WTPVHTIWLR IIILFLVWIW NGLGSTTMMR QSCSKDWMIS IPPLPIRLGS PSPLCPTGTK QPMELEEWPV VAANNDRVRK PEGRGAWLTR NGRQDTAGGS
201: LQPHVWWPVW EGAHCSSSDG FRSFSGQ

Best Arabidopsis Sequence Match ( AT3G46460.1 )
(BLAST)

001: MNSQACLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFYAIMSF PQNYPNSPPT VRFTSDIWHP NVYPDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWREKRDE FKKKVSRCVR KSQEMF

Arabidopsis Description

UBC13UBC13 [Source:UniProtKB/TrEMBL;Acc:A0A178V960]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.