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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 2
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038376_P001 Maize extracellular 68.35 95.86
Os05t0460200-01 Rice cytosol, nucleus, plastid 67.51 94.67
TraesCS1D01G284200.1 Wheat cytosol, nucleus, plastid 65.4 91.72
TraesCS1A01G285200.1 Wheat cytosol, nucleus, plastid 65.4 91.72
HORVU1Hr1G072200.2 Barley cytosol 65.4 91.72
Zm00001d012421_P003 Maize cytosol, nucleus, plastid 64.56 90.53
Zm00001d042929_P001 Maize cytosol, nucleus, plastid 63.71 89.35
VIT_08s0007g00120.t01 Wine grape mitochondrion 63.29 89.29
GSMUA_Achr6P34220_001 Banana plastid 62.87 88.69
GSMUA_Achr11P... Banana cytosol, nucleus, plastid 62.03 87.5
KRH10280 Soybean nucleus 60.76 86.75
KRH29815 Soybean cytosol 60.76 86.75
KRH23052 Soybean nucleus 60.76 86.75
AT5G59300.1 Thale cress nucleus 60.76 86.75
KRH24817 Soybean cytosol, nucleus, plastid 60.76 86.23
KXG22164 Sorghum cytosol, nucleus, plastid 62.45 86.05
VIT_13s0019g00910.t01 Wine grape plastid 60.76 85.71
VIT_06s0004g04430.t01 Wine grape cytosol, nucleus, plastid 61.18 85.29
AT3G46460.1 Thale cress cytosol 59.49 84.94
Solyc05g054550.2.1 Tomato cytosol, nucleus, plastid 60.34 84.12
Bra002579.1-P Field mustard cytosol 56.12 83.65
CDY32651 Canola nucleus 59.92 83.53
CDY02882 Canola cytosol, mitochondrion, nucleus 59.92 83.53
Bra020324.1-P Field mustard nucleus 59.92 83.53
PGSC0003DMT400060478 Potato cytosol, nucleus, plastid 59.07 83.33
Solyc04g011430.2.1 Tomato cytosol 57.81 83.03
PGSC0003DMT400060483 Potato cytosol, nucleus, plastid 59.49 82.94
PGSC0003DMT400071311 Potato nucleus 57.38 82.42
CDY62383 Canola nucleus 57.38 81.44
Bra003210.1-P Field mustard nucleus 57.38 81.44
CDY53695 Canola nucleus 57.38 81.44
CDY33025 Canola cytosol 56.54 81.21
CDY02931 Canola cytosol, nucleus, plastid 56.96 80.84
CDX76101 Canola cytosol, nucleus, plastid 56.96 80.84
Bra014751.1-P Field mustard cytosol, nucleus, plastid 56.54 80.24
Solyc05g054540.2.1 Tomato plastid 57.38 80.0
Bra007157.1-P Field mustard nucleus 56.12 79.64
CDY41239 Canola nucleus 56.12 79.64
CDY40214 Canola nucleus 56.12 79.64
GSMUA_Achr5P08370_001 Banana cytosol 45.57 79.41
TraesCS1B01G294400.2 Wheat plastid 65.4 77.5
Solyc09g009720.1.1 Tomato nucleus 54.01 76.65
PGSC0003DMT400023134 Potato nucleus 54.01 76.65
CDX80292 Canola cytosol 56.12 74.3
AT3G55380.2 Thale cress nucleus 56.54 66.67
Zm00001d040631_P001 Maize cytosol 43.88 45.81
Zm00001d027427_P001 Maize nucleus 22.78 33.75
Zm00001d047354_P001 Maize nucleus 21.94 32.5
Zm00001d048473_P003 Maize nucleus 21.94 32.5
Zm00001d002570_P001 Maize mitochondrion, nucleus 21.1 31.45
Zm00001d029740_P002 Maize nucleus 20.25 30.0
Zm00001d008260_P001 Maize cytosol, mitochondrion, nucleus, plastid 22.36 28.96
Zm00001d009034_P002 Maize nucleus 34.18 20.93
Zm00001d008383_P001 Maize plastid 19.83 20.43
Zm00001d008261_P003 Maize nucleus 19.83 18.5
Zm00001d002572_P002 Maize cytosol, golgi, mitochondrion, nucleus 22.36 16.36
Zm00001d029705_P032 Maize plasma membrane 21.94 9.56
Zm00001d005779_P153 Maize plasma membrane 15.19 6.0
Protein Annotations
EntrezGene:100272466MapMan:19.2.2.1.6.1.1MapMan:19.2.4.1.2Gene3D:3.10.110.10UniProt:A0A1D6FRP9ProteinID:AQK94268.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0016740
InterPro:IPR000608InterPro:IPR016135PFAM:PF00179ScanProsite:PS00183PFscan:PS50127PANTHER:PTHR24067
PANTHER:PTHR24067:SF237SMART:SM00212SUPFAM:SSF54495InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_ASInterPro:UBQ-conjugating_enzyme/RWD
UniParc:UPI00084584EDEnsemblPlantsGene:Zm00001d010534EnsemblPlants:Zm00001d010534_P001EnsemblPlants:Zm00001d010534_T001SEG:seg:
Description
ubiquitin carrier protein 7
Coordinates
chr8:+:119590651..119595654
Molecular Weight (calculated)
26496.7 Da
IEP (calculated)
5.622
GRAVY (calculated)
-0.117
Length
237 amino acids
Sequence
(BLAST)
001: MAGTPSQASL LLQKQLKDLA KNPVDGFSAG LVDDSNVFEW QVTIIGPPDT LYDGGYFNAI MTFPQNYPNS PPSVRFTSGM WHPNVYPDGR VCISILHPPG
101: EDPSGYELAS ERWTPVHTVE SIVLSIISML SSPNDESPAN IEAAVSAPYN IPSLSLWVGK QTAVVFFVLL PVQRLKALLN IYCDNFLLDY HSASAIVKMP
201: LVSEVIHDFA LQKDWREKRD EFKKKVRQCV RRSQEML
Best Arabidopsis Sequence Match ( AT3G46460.1 )
(BLAST)
001: MNSQACLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFYAIMSF PQNYPNSPPT VRFTSDIWHP NVYPDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWREKRDE FKKKVSRCVR KSQEMF
Arabidopsis Description
UBC13UBC13 [Source:UniProtKB/TrEMBL;Acc:A0A178V960]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.