Factsheet for Zm00001d002570_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, mitochondrion

Predictor Summary:

mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12706	Sorghum	mitochondrion	91.82	91.82
Zm00001d027427_P001	Maize	nucleus	70.44	70.0
TraesCS2B01G413400.1	Wheat	peroxisome	69.81	69.81
Zm00001d048473_P003	Maize	nucleus	69.81	69.38
Zm00001d047354_P001	Maize	nucleus	69.18	68.75
PGSC0003DMT400046775	Potato	nucleus	64.15	63.35
Zm00001d029740_P002	Maize	nucleus	63.52	63.12
Solyc03g112720.2.1	Tomato	nucleus	59.12	63.09
TraesCS2D01G393100.2	Wheat	endoplasmic reticulum	62.89	57.47
TraesCS2A01G395300.2	Wheat	endoplasmic reticulum, extracellular	62.26	56.9
Os04t0580400-01	Rice	cytosol	49.69	56.83
HORVU2Hr1G094030.8	Barley	nucleus, plastid	72.33	53.24
CDX73361	Canola	extracellular	25.16	43.48
Zm00001d002572_P002	Maize	cytosol, golgi, mitochondrion, nucleus	79.25	38.89
Zm00001d042929_P001	Maize	cytosol, nucleus, plastid	31.45	29.59
Zm00001d012421_P003	Maize	cytosol, nucleus, plastid	30.82	28.99
Zm00001d038376_P001	Maize	extracellular	30.82	28.99
Zm00001d008260_P001	Maize	cytosol, mitochondrion, nucleus, plastid	32.08	27.87
Zm00001d010534_P001	Maize	cytosol	31.45	21.1
Zm00001d040631_P001	Maize	cytosol	26.42	18.5
Zm00001d008261_P003	Maize	nucleus	27.67	17.32
Zm00001d008383_P001	Maize	plastid	20.13	13.91
Zm00001d009034_P002	Maize	nucleus	22.64	9.3
Zm00001d029705_P032	Maize	plasma membrane	23.9	6.99
Zm00001d005779_P153	Maize	plasma membrane	16.98	4.5

Protein Annotations

EntrezGene:103646037	MapMan:19.2.2.2.3	Gene3D:3.10.110.10	UniProt:A0A1D6E1Y4	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0016925
GO:GO:0019538	GO:GO:0019789	InterPro:IPR000608	InterPro:IPR016135	ProteinID:ONM14674.1	PFAM:PF00179
PFscan:PS50127	PANTHER:PTHR43927	PANTHER:PTHR43927:SF2	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000221CE2F	InterPro:Ubc9	EnsemblPlantsGene:Zm00001d002570	EnsemblPlants:Zm00001d002570_P001	EnsemblPlants:Zm00001d002570_T001

Description

SUMO-conjugating enzyme SCE1

Coordinates

chr2:+:15641587..15643396

Molecular Weight (calculated)

17733.2 Da

IEP (calculated)

9.200

GRAVY (calculated)

-0.389

Length

159 amino acids

Sequence
(BLAST)

001: MASGGVARAR LAEERKSWRR SHPHGFMAKP ATLPDGSVNL MLWNCVVPGK QGTDWEGGHF PLTLHFDEDY PSRPPHCKFP AGFFHVNVYN TGSVCLSILG
101: DAWKPSITVR QTLIGIQDLL DNPNPASPAQ NLSYVLFTQN MPEYASRVRQ QAKRYPSLV

Best Arabidopsis Sequence Match ( AT3G57870.1 )
(BLAST)

001: MASGIARGRL AEERKSWRKN HPHGFVAKPE TGQDGTVNLM VWHCTIPGKA GTDWEGGFFP LTMHFSEDYP SKPPKCKFPQ GFFHPNVYPS GTVCLSILNE
101: DYGWRPAITV KQILVGIQDL LDTPNPADPA QTDGYHLFCQ DPVEYKKRVK LQSKQYPALV

Arabidopsis Description

SCE1SCE1A [Source:UniProtKB/TrEMBL;Acc:A0A178V9H0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.