Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G413400.1 | Wheat | peroxisome | 68.98 | 93.71 |
| TraesCS2D01G393100.2 | Wheat | endoplasmic reticulum | 61.11 | 75.86 |
| TraesCS2A01G395300.2 | Wheat | endoplasmic reticulum, extracellular | 61.11 | 75.86 |
| EES12705 | Sorghum | mitochondrion | 55.56 | 75.47 |
| Zm00001d002570_P001 | Maize | mitochondrion, nucleus | 53.24 | 72.33 |
| EES12706 | Sorghum | mitochondrion | 52.78 | 71.7 |
| Solyc03g112720.2.1 | Tomato | nucleus | 49.07 | 71.14 |
| OQU82197 | Sorghum | cytosol | 52.78 | 67.86 |
| PGSC0003DMT400046775 | Potato | nucleus | 50.46 | 67.7 |
| Os04t0580400-01 | Rice | cytosol | 40.74 | 63.31 |
| HORVU1Hr1G051610.3 | Barley | nucleus | 50.93 | 61.8 |
| HORVU4Hr1G084760.5 | Barley | plastid | 52.31 | 58.55 |
| HORVU4Hr1G050950.1 | Barley | cytosol | 10.65 | 48.94 |
| HORVU7Hr1G034980.2 | Barley | cytosol, plastid, vacuole | 17.13 | 40.66 |
| CDX73361 | Canola | extracellular | 17.13 | 40.22 |
| HORVU4Hr1G033410.3 | Barley | cytosol | 14.81 | 40.0 |
| Zm00001d002572_P002 | Maize | cytosol, golgi, mitochondrion, nucleus | 53.7 | 35.8 |
| HORVU1Hr1G072200.2 | Barley | cytosol | 25.0 | 31.95 |
| HORVU3Hr1G038430.3 | Barley | nucleus, plastid | 21.76 | 24.87 |
| HORVU3Hr1G086540.2 | Barley | endoplasmic reticulum, golgi, plastid | 25.46 | 21.74 |
Protein Annotations
| MapMan:19.2.2.2.3 | Gene3D:3.10.110.10 | UniProt:A0A287IZN4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016925 | GO:GO:0019538 |
| GO:GO:0019789 | EnsemblPlantsGene:HORVU2Hr1G094030 | EnsemblPlants:HORVU2Hr1G094030.8 | InterPro:IPR000608 | InterPro:IPR016135 | PFAM:PF00179 |
| PFscan:PS50127 | PANTHER:PTHR43927 | PANTHER:PTHR43927:SF2 | SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000B47A8ED | InterPro:Ubc9 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:662015464..662019114
Molecular Weight (calculated)
24677.6 Da
IEP (calculated)
10.592
GRAVY (calculated)
-0.826
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: SVQAPSYIHC PHRPETEPKR QPKVQNSPRR RGTERPRGSP WKTTKRRRRP QAIVATWMAS GGIARGRLAE ERKSWRKNHP HGFVAKPETL PDGSVNLMLW
101: RCVIPGKPGT DWEGGYFPLT LQFDDNYPTT APSCRFPAGF FHINVYDSGA VCLSILGAAW KPSITVKQIL VGIQELLDDP NPNSAAQHRC YELYKKNMPE
201: YKNKIREQAK RYPSRM
101: RCVIPGKPGT DWEGGYFPLT LQFDDNYPTT APSCRFPAGF FHINVYDSGA VCLSILGAAW KPSITVKQIL VGIQELLDDP NPNSAAQHRC YELYKKNMPE
201: YKNKIREQAK RYPSRM
001: MASGIARGRL AEERKSWRKN HPHGFVAKPE TGQDGTVNLM VWHCTIPGKA GTDWEGGFFP LTMHFSEDYP SKPPKCKFPQ GFFHPNVYPS GTVCLSILNE
101: DYGWRPAITV KQILVGIQDL LDTPNPADPA QTDGYHLFCQ DPVEYKKRVK LQSKQYPALV
101: DYGWRPAITV KQILVGIQDL LDTPNPADPA QTDGYHLFCQ DPVEYKKRVK LQSKQYPALV
Arabidopsis Description
SCE1SCE1A [Source:UniProtKB/TrEMBL;Acc:A0A178V9H0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.