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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:
  • plastid 2
  • cytosol 1
  • vacuole 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G033410.3 Barley cytosol 70.33 80.0
HORVU4Hr1G050950.1 Barley cytosol 40.66 78.72
HORVU1Hr1G051610.3 Barley nucleus 40.66 20.79
HORVU4Hr1G084760.5 Barley plastid 41.76 19.69
HORVU3Hr1G038430.3 Barley nucleus, plastid 40.66 19.58
HORVU1Hr1G072200.2 Barley cytosol 36.26 19.53
HORVU2Hr1G094030.8 Barley nucleus, plastid 40.66 17.13
HORVU3Hr1G086540.2 Barley endoplasmic reticulum, golgi, plastid 36.26 13.04
Protein Annotations
EnsemblPlants:HORVU7Hr1G034980.2EnsemblPlantsGene:HORVU7Hr1G034980Gene3D:3.10.110.10GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0016740InterPro:IPR000608InterPro:IPR016135InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_ASInterPro:UBQ-conjugating_enzyme/RWDPANTHER:PTHR43898PANTHER:PTHR43898:SF7PFAM:PF00179PFscan:PS50127
ScanProsite:PS00183SUPFAM:SSF54495UniParc:UPI000B4697B9UniProt:A0A287W0Y9MapMan:35.1:
Description
No Description!
Coordinates
chrchr7H:-:74904414..74905243
Molecular Weight (calculated)
10457.6 Da
IEP (calculated)
7.338
GRAVY (calculated)
-0.012
Length
91 amino acids
Sequence
(BLAST)
1: LPNVGCLQDL NTPWNCGTFK LTLQFTKDYR NNPSTVRFVS TMFHPNIYVD GSICLDILQN QWSPLYDVAA ILTPIQQLLL SLHNLYCCHQ K
Best Arabidopsis Sequence Match ( AT2G02760.1 )
(BLAST)
001: MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLSLQFS EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMF SESKREYNRR VREVVEQSWT AD
Arabidopsis Description
UBC2UBC2 [Source:UniProtKB/TrEMBL;Acc:A0A178W0U6]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.