Factsheet for HORVU3Hr1G086540.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 1
plastid 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plastid
Any Predictor:	endoplasmic reticulum, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
TargetP:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G357700.1	Wheat	cytosol, nucleus, plastid	66.8	100.0
TraesCS3B01G390400.1	Wheat	cytosol, nucleus, plastid	66.8	100.0
TraesCS3D01G351600.1	Wheat	cytosol, nucleus, plastid	66.8	100.0
Os01t0839700-01	Rice	cytosol, nucleus, plastid	62.85	94.08
EES03856	Sorghum	cytosol, nucleus, plastid	62.06	92.9
Zm00001d012421_P003	Maize	cytosol, nucleus, plastid	61.66	92.31
HORVU1Hr1G072200.2	Barley	cytosol	61.26	91.72
GSMUA_Achr6P34220_001	Banana	plastid	60.47	91.07
Zm00001d042929_P001	Maize	cytosol, nucleus, plastid	59.68	89.35
VIT_08s0007g00120.t01	Wine grape	mitochondrion	58.89	88.69
KRH23052	Soybean	nucleus	56.92	86.75
KRH10280	Soybean	nucleus	56.92	86.75
VIT_13s0019g00910.t01	Wine grape	plastid	57.31	86.31
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	57.31	86.31
AT5G59300.1	Thale cress	nucleus	56.52	86.14
PGSC0003DMT400060478	Potato	cytosol, nucleus, plastid	56.92	85.71
AT3G46460.1	Thale cress	cytosol	56.13	85.54
KRH29815	Soybean	cytosol	56.13	85.54
KRH24817	Soybean	cytosol, nucleus, plastid	56.13	85.03
Solyc05g054550.2.1	Tomato	cytosol, nucleus, plastid	56.92	84.71
PGSC0003DMT400060483	Potato	cytosol, nucleus, plastid	56.92	84.71
VIT_06s0004g04430.t01	Wine grape	cytosol, nucleus, plastid	56.92	84.71
Bra002579.1-P	Field mustard	cytosol	52.96	84.28
Solyc04g011430.2.1	Tomato	cytosol	54.94	84.24
PGSC0003DMT400071311	Potato	nucleus	54.55	83.64
CDY33025	Canola	cytosol	54.15	83.03
CDY62383	Canola	nucleus	54.55	82.63
Bra003210.1-P	Field mustard	nucleus	54.55	82.63
CDY53695	Canola	nucleus	54.55	82.63
Solyc05g054540.2.1	Tomato	plastid	55.34	82.35
CDY32651	Canola	nucleus	54.94	81.76
CDY02882	Canola	cytosol, mitochondrion, nucleus	54.94	81.76
Bra020324.1-P	Field mustard	nucleus	54.94	81.76
CDY02931	Canola	cytosol, nucleus, plastid	52.96	80.24
PGSC0003DMT400023134	Potato	nucleus	52.96	80.24
CDX76101	Canola	cytosol, nucleus, plastid	52.96	80.24
Solyc09g009720.1.1	Tomato	nucleus	52.96	80.24
GSMUA_Achr5P08370_001	Banana	cytosol	43.08	80.15
CDY41239	Canola	nucleus	52.57	79.64
CDY40214	Canola	nucleus	52.57	79.64
Bra007157.1-P	Field mustard	nucleus	52.57	79.64
Bra014751.1-P	Field mustard	cytosol, nucleus, plastid	52.57	79.64
CDX80292	Canola	cytosol	53.75	75.98
AT3G55380.2	Thale cress	nucleus	52.96	66.67
HORVU4Hr1G050950.1	Barley	cytosol	9.88	53.19
Zm00001d040631_P001	Maize	cytosol	41.9	46.7
HORVU4Hr1G033410.3	Barley	cytosol	12.25	38.75
HORVU7Hr1G034980.2	Barley	cytosol, plastid, vacuole	13.04	36.26
HORVU1Hr1G051610.3	Barley	nucleus	19.76	28.09
HORVU3Hr1G038430.3	Barley	nucleus, plastid	20.95	28.04
HORVU4Hr1G084760.5	Barley	plastid	21.34	27.98
HORVU2Hr1G094030.8	Barley	nucleus, plastid	21.74	25.46
Zm00001d009034_P002	Maize	nucleus	32.02	20.93
Zm00001d008383_P001	Maize	plastid	18.97	20.87
Zm00001d029705_P032	Maize	plasma membrane	20.95	9.74
Zm00001d005779_P153	Maize	plasma membrane	14.62	6.17

Protein Annotations

MapMan:19.2.2.1.6.1.1	MapMan:19.2.4.1.2	Gene3D:3.10.110.10	UniProt:A0A287M3A6	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016740	EnsemblPlantsGene:HORVU3Hr1G086540
EnsemblPlants:HORVU3Hr1G086540.2	InterPro:IPR000608	InterPro:IPR016135	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127
PANTHER:PTHR24067	PANTHER:PTHR24067:SF237	SMART:SM00212	SUPFAM:SSF54495	SignalP:SignalP-noTM	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_AS	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000B478F9F	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:+:617757572..617763506

Molecular Weight (calculated)

28031.3 Da

IEP (calculated)

6.243

GRAVY (calculated)

-0.332

Length

253 amino acids

Sequence
(BLAST)

001: SALQRSPDSP HYNWLLCWLL LPLINNLSAF SFPSLSSPLV PIPFSELLPI NKAARGGHQS PSPPTERPRI IPPPAAKTLA AADPMATASS QASLLLQKQL
101: RDLAKHPVDG FSAGLVDDSN VFEWQVTIIG PPETLYDGGY FNAIMSFPQN YPNSPPTVRF TSEMWHPNVY PDGRVCISIL HPPGDDPNGY ELASERWTPV
201: HTVESIVLSI ISMLSSPNDE SPANIEAAKD WREKQDEFKK KVRRAVRKSQ EML

Best Arabidopsis Sequence Match ( AT5G59300.1 )
(BLAST)

001: MASQASLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFNAIMTF PQNYPNSPPT VRFTSDMWHP NVYSDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF

Arabidopsis Description

UBC7Ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:Q42540]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.