Factsheet for Bra003210.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
mitochondrion 2
cytosol 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62383	Canola	nucleus	100.0	100.0
CDY53695	Canola	nucleus	100.0	100.0
Bra014751.1-P	Field mustard	cytosol, nucleus, plastid	95.81	95.81
Bra007157.1-P	Field mustard	nucleus	91.62	91.62
VIT_13s0019g00910.t01	Wine grape	plastid	87.43	86.9
PGSC0003DMT400060478	Potato	cytosol, nucleus, plastid	87.43	86.9
PGSC0003DMT400060483	Potato	cytosol, nucleus, plastid	88.02	86.47
Solyc04g011430.2.1	Tomato	cytosol	85.03	86.06
Solyc05g054550.2.1	Tomato	cytosol, nucleus, plastid	87.43	85.88
PGSC0003DMT400071311	Potato	nucleus	84.43	85.45
Bra002579.1-P	Field mustard	cytosol	80.84	84.91
GSMUA_Achr6P34220_001	Banana	plastid	85.03	84.52
Os01t0839700-01	Rice	cytosol, nucleus, plastid	85.03	84.02
Bra020324.1-P	Field mustard	nucleus	85.03	83.53
Solyc05g054540.2.1	Tomato	plastid	85.03	83.53
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	83.23	82.74
Zm00001d042929_P001	Maize	cytosol, nucleus, plastid	82.63	81.66
Zm00001d038376_P001	Maize	extracellular	82.63	81.66
TraesCS3D01G351600.1	Wheat	cytosol, nucleus, plastid	82.63	81.66
TraesCS3B01G390400.1	Wheat	cytosol, nucleus, plastid	82.63	81.66
TraesCS3A01G357700.1	Wheat	cytosol, nucleus, plastid	82.63	81.66
TraesCS1D01G284200.1	Wheat	cytosol, nucleus, plastid	82.63	81.66
TraesCS1A01G285200.1	Wheat	cytosol, nucleus, plastid	82.63	81.66
Os05t0460200-01	Rice	cytosol, nucleus, plastid	82.63	81.66
Zm00001d012421_P003	Maize	cytosol, nucleus, plastid	82.04	81.07
EES03856	Sorghum	cytosol, nucleus, plastid	82.04	81.07
HORVU1Hr1G072200.2	Barley	cytosol	82.04	81.07
AT3G55380.2	Thale cress	nucleus	93.41	77.61
GSMUA_Achr5P08370_001	Banana	cytosol	59.28	72.79
KXG22164	Sorghum	cytosol, nucleus, plastid	74.85	72.67
TraesCS1B01G294400.2	Wheat	plastid	82.63	69.0
Zm00001d010534_P001	Maize	cytosol	81.44	57.38
GSMUA_Achr5P08330_001	Banana	extracellular, golgi, vacuole	31.14	54.74
HORVU3Hr1G086540.2	Barley	endoplasmic reticulum, golgi, plastid	82.63	54.55
Zm00001d040631_P001	Maize	cytosol	56.89	41.85
Bra014602.1-P	Field mustard	cytosol	32.93	34.38
Bra003301.1-P	Field mustard	cytosol	32.93	34.38
Bra007363.1-P	Field mustard	cytosol	32.34	33.75
Bra030487.1-P	Field mustard	cytosol, plastid	34.13	32.76
Bra038253.1-P	Field mustard	nucleus	34.13	31.49
Bra035819.1-P	Field mustard	cytosol, plastid	34.13	31.49
Bra018852.1-P	Field mustard	cytosol, plastid	34.13	31.49
Bra014406.1-P	Field mustard	cytosol	29.34	30.62
Bra014255.1-P	Field mustard	cytosol	29.94	30.49
Zm00001d008383_P001	Maize	plastid	27.54	20.0
Zm00001d009034_P002	Maize	nucleus	41.92	18.09
Zm00001d029705_P032	Maize	plasma membrane	29.34	9.01
Zm00001d005779_P153	Maize	plasma membrane	20.36	5.67

Protein Annotations

MapMan:19.2.2.1.6.1.1	MapMan:19.2.4.1.2	Gene3D:3.10.110.10	EnsemblPlantsGene:Bra003210	EnsemblPlants:Bra003210.1	EnsemblPlants:Bra003210.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000608	InterPro:IPR016135	UniProt:M4CG77	PFAM:PF00179	ScanProsite:PS00183	PFscan:PS50127
PANTHER:PTHR24067	PANTHER:PTHR24067:SF174	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS
InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI00025414AF	SEG:seg	:	:	:

Description

AT3G55380 (E=8e-085) UBC14 | UBC14 (ubiquitin-conjugating enzyme 14); ubiquitin-protein ligase

Coordinates

chrA07:+:11898397..11899247

Molecular Weight (calculated)

18744.2 Da

IEP (calculated)

4.998

GRAVY (calculated)

-0.441

Length

167 amino acids

Sequence
(BLAST)

001: MAKNQASLLL QKQLKDLCKH PVDGFSAGLV DENNVFQWSV SIMGPPDTLY EGGFFNAIMT FPEDYPNSPP TVKFTSEMWH PNVYSDGKVC ISILHPPGDD
101: PNGYELASER WTPVHTVESI VLSIISMLSG PNDESPANVE AAKEWRDNRA EFRKKVSRCV RKSQEML

Best Arabidopsis Sequence Match ( AT3G55380.1 )
(BLAST)

001: MANNQASLLL QKQLKDLCKK PVDGFSAGLV DEKNVFQWSV SIMGPPDTLY EGGFFNAIMS FPENYPVSPP TVTFTSEMWH PNVYSDGKVC ISILHPPGDD
101: PHGYELASER WTPVHTVESI VLSIISMLSG PNDESPANVE AAKEWRDNRA EFRKKVSRCV RRSQEML

Arabidopsis Description

UBC14Ubiquitin-conjugating enzyme 14 [Source:UniProtKB/TrEMBL;Acc:F4IWU7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.