Subcellular Localization
min:
: max
Winner_takes_all: extracellular, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 6
- extracellular 5
- golgi 5
- plasma membrane 4
- endoplasmic reticulum 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P34220_001 | Banana | plastid | 63.16 | 35.71 |
| AT3G46460.1 | Thale cress | cytosol | 58.95 | 33.73 |
| KRH10280 | Soybean | nucleus | 58.95 | 33.73 |
| KRH23052 | Soybean | nucleus | 58.95 | 33.73 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 58.95 | 33.33 |
| VIT_13s0019g00910.t01 | Wine grape | plastid | 58.95 | 33.33 |
| Bra002579.1-P | Field mustard | cytosol | 55.79 | 33.33 |
| KRH29815 | Soybean | cytosol | 57.89 | 33.13 |
| Bra020324.1-P | Field mustard | nucleus | 58.95 | 32.94 |
| CDY32651 | Canola | nucleus | 58.95 | 32.94 |
| KRH24817 | Soybean | cytosol, nucleus, plastid | 57.89 | 32.93 |
| VIT_08s0007g00120.t01 | Wine grape | mitochondrion | 57.89 | 32.74 |
| AT5G59300.1 | Thale cress | nucleus | 56.84 | 32.53 |
| CDY02882 | Canola | cytosol, mitochondrion, nucleus | 57.89 | 32.35 |
| VIT_06s0004g04430.t01 | Wine grape | cytosol, nucleus, plastid | 57.89 | 32.35 |
| CDY33025 | Canola | cytosol | 55.79 | 32.12 |
| Solyc04g011430.2.1 | Tomato | cytosol | 55.79 | 32.12 |
| CDX76101 | Canola | cytosol, nucleus, plastid | 55.79 | 31.74 |
| CDY02931 | Canola | cytosol, nucleus, plastid | 55.79 | 31.74 |
| PGSC0003DMT400060478 | Potato | cytosol, nucleus, plastid | 55.79 | 31.55 |
| Solyc05g054550.2.1 | Tomato | cytosol, nucleus, plastid | 55.79 | 31.18 |
| Solyc05g054540.2.1 | Tomato | plastid | 55.79 | 31.18 |
| PGSC0003DMT400060483 | Potato | cytosol, nucleus, plastid | 55.79 | 31.18 |
| CDY62383 | Canola | nucleus | 54.74 | 31.14 |
| CDY53695 | Canola | nucleus | 54.74 | 31.14 |
| Bra014751.1-P | Field mustard | cytosol, nucleus, plastid | 54.74 | 31.14 |
| Bra003210.1-P | Field mustard | nucleus | 54.74 | 31.14 |
| PGSC0003DMT400071311 | Potato | nucleus | 53.68 | 30.91 |
| Solyc09g009720.1.1 | Tomato | nucleus | 52.63 | 29.94 |
| CDY41239 | Canola | nucleus | 52.63 | 29.94 |
| CDY40214 | Canola | nucleus | 52.63 | 29.94 |
| Bra007157.1-P | Field mustard | nucleus | 52.63 | 29.94 |
| PGSC0003DMT400023134 | Potato | nucleus | 52.63 | 29.94 |
| CDX80292 | Canola | cytosol | 55.79 | 29.61 |
| AT3G55380.2 | Thale cress | nucleus | 54.74 | 25.87 |
| GSMUA_Achr10P... | Banana | cytosol | 29.47 | 21.37 |
| GSMUA_Achr7P22730_001 | Banana | cytosol | 33.68 | 17.49 |
| GSMUA_Achr3P08740_001 | Banana | cytosol | 32.63 | 17.03 |
| GSMUA_Achr9P17810_001 | Banana | cytosol | 32.63 | 16.76 |
| GSMUA_Achr1P03640_001 | Banana | nucleus | 24.21 | 14.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.16 | 13.75 |
| GSMUA_Achr9P14150_001 | Banana | nucleus | 23.16 | 13.75 |
| GSMUA_Achr3P05370_001 | Banana | cytosol | 23.16 | 13.75 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 13.68 | 9.56 |
Protein Annotations
| Gene3D:3.10.110.10 | MapMan:35.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSMUA_Achr5G08330_001 |
| EnsemblPlants:GSMUA_Achr5P08330_001 | EnsemblPlants:GSMUA_Achr5T08330_001 | InterPro:IPR000608 | InterPro:IPR016135 | UniProt:M0SWR2 | PFAM:PF00179 |
| PFscan:PS50127 | PANTHER:PTHR24067 | PANTHER:PTHR24067:SF174 | SUPFAM:SSF54495 | TMHMM:TMhelix | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0002959C3A | SEG:seg | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G08330_001]
Coordinates
chr5:-:6064132..6066813
Molecular Weight (calculated)
11009.6 Da
IEP (calculated)
6.679
GRAVY (calculated)
0.205
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: MNLTQATGDK IILGGYLLLL KQLIFLIDWG WVDFIFFLLS RFCLVESIVL SIISMLSSPN DESPANVEAA KEWRESRDEF KKKVSRIVRR SQEML
001: MELCKCSEGG FFYAIMSFPQ NYPNSPPTVR FTSDIWHPNV YPDGRVCISI LHPPGDDPSG YELASERWTP VHTVESIMLS IISMLSGPND ESPANVEAAK
101: EWREKRDEFK KKVSRCVRKS QEMF
101: EWREKRDEFK KKVSRCVRKS QEMF
Arabidopsis Description
UBC13UBC13 [Source:UniProtKB/TrEMBL;Acc:A0A178V960]
SUBAcon: [extracellular,cytosol,nucleus]
SUBAcon: [extracellular,cytosol,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.