Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003210.1-P | Field mustard | nucleus | 77.61 | 93.41 |
| CDY53695 | Canola | nucleus | 77.61 | 93.41 |
| CDY62383 | Canola | nucleus | 77.61 | 93.41 |
| CDY02931 | Canola | cytosol, nucleus, plastid | 77.11 | 92.81 |
| CDX76101 | Canola | cytosol, nucleus, plastid | 76.62 | 92.22 |
| Bra014751.1-P | Field mustard | cytosol, nucleus, plastid | 76.12 | 91.62 |
| AT5G59300.1 | Thale cress | nucleus | 72.14 | 87.35 |
| PGSC0003DMT400060478 | Potato | cytosol, nucleus, plastid | 72.14 | 86.31 |
| PGSC0003DMT400060483 | Potato | cytosol, nucleus, plastid | 72.64 | 85.88 |
| Solyc05g054550.2.1 | Tomato | cytosol, nucleus, plastid | 72.14 | 85.29 |
| Solyc04g011430.2.1 | Tomato | cytosol | 69.65 | 84.85 |
| AT3G46460.1 | Thale cress | cytosol | 69.65 | 84.34 |
| PGSC0003DMT400071311 | Potato | nucleus | 69.15 | 84.24 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 70.15 | 83.93 |
| VIT_13s0019g00910.t01 | Wine grape | plastid | 69.65 | 83.33 |
| Solyc05g054540.2.1 | Tomato | plastid | 70.15 | 82.94 |
| Os01t0839700-01 | Rice | cytosol, nucleus, plastid | 68.66 | 81.66 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 68.16 | 81.55 |
| Zm00001d042929_P001 | Maize | cytosol, nucleus, plastid | 67.16 | 79.88 |
| TraesCS3D01G351600.1 | Wheat | cytosol, nucleus, plastid | 66.67 | 79.29 |
| TraesCS3B01G390400.1 | Wheat | cytosol, nucleus, plastid | 66.67 | 79.29 |
| TraesCS3A01G357700.1 | Wheat | cytosol, nucleus, plastid | 66.67 | 79.29 |
| Os05t0460200-01 | Rice | cytosol, nucleus, plastid | 66.17 | 78.7 |
| Zm00001d038376_P001 | Maize | extracellular | 66.17 | 78.7 |
| Zm00001d012421_P003 | Maize | cytosol, nucleus, plastid | 66.17 | 78.7 |
| EES03856 | Sorghum | cytosol, nucleus, plastid | 66.17 | 78.7 |
| TraesCS1A01G285200.1 | Wheat | cytosol, nucleus, plastid | 65.17 | 77.51 |
| TraesCS1D01G284200.1 | Wheat | cytosol, nucleus, plastid | 65.17 | 77.51 |
| HORVU1Hr1G072200.2 | Barley | cytosol | 64.68 | 76.92 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 49.25 | 72.79 |
| KXG22164 | Sorghum | cytosol, nucleus, plastid | 60.7 | 70.93 |
| TraesCS1B01G294400.2 | Wheat | plastid | 65.17 | 65.5 |
| Zm00001d010534_P001 | Maize | cytosol | 66.67 | 56.54 |
| GSMUA_Achr5P08330_001 | Banana | extracellular, golgi, vacuole | 25.87 | 54.74 |
| HORVU3Hr1G086540.2 | Barley | endoplasmic reticulum, golgi, plastid | 66.67 | 52.96 |
| Zm00001d040631_P001 | Maize | cytosol | 47.76 | 42.29 |
| AT3G57870.1 | Thale cress | cytosol | 25.87 | 32.5 |
| AT1G50490.1 | Thale cress | plastid | 26.37 | 29.44 |
| AT3G20060.1 | Thale cress | plastid | 25.87 | 28.73 |
| Zm00001d008383_P001 | Maize | plastid | 23.38 | 20.43 |
| Zm00001d009034_P002 | Maize | nucleus | 35.32 | 18.35 |
| Zm00001d029705_P032 | Maize | plasma membrane | 24.88 | 9.19 |
| Zm00001d005779_P153 | Maize | plasma membrane | 16.92 | 5.67 |
Protein Annotations
| MapMan:19.2.2.1.6.1.1 | MapMan:19.2.4.1.2 | Gene3D:3.10.110.10 | EntrezGene:824704 | ProteinID:AEE79377.1 | ArrayExpress:AT3G55380 |
| EnsemblPlantsGene:AT3G55380 | RefSeq:AT3G55380 | TAIR:AT3G55380 | RefSeq:AT3G55380-TAIR-G | EnsemblPlants:AT3G55380.2 | TAIR:AT3G55380.2 |
| Unigene:At.206 | UniProt:F4IWU7 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000608 |
| InterPro:IPR016135 | RefSeq:NP_001190096.1 | PFAM:PF00179 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR24067 | PANTHER:PTHR24067:SF174 | SMART:SM00212 |
| SUPFAM:SSF54495 | Symbol:UBC14 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0001E92E6F |
| SEG:seg | : | : | : | : | : |
Description
UBC14Ubiquitin-conjugating enzyme 14 [Source:UniProtKB/TrEMBL;Acc:F4IWU7]
Coordinates
chr3:+:20531407..20533173
Molecular Weight (calculated)
22601.9 Da
IEP (calculated)
5.303
GRAVY (calculated)
-0.327
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MANNQASLLL QKQLKDLCKK PVDGFSAGLV DEKNVFQWSV SIMGPPDTLY EGGFFNAIMS FPENYPVSPP TVTFTSEMWH PNVYSDGKVC ISILHPPGDD
101: PHGYELASER WTPVHTLVET DMFCSILSLY SDCFSNVRGI YKSGLRNTLE DKSIVLSIIS MLSGPNDESP ANVEAAKEWR DNRAEFRKKV SRCVRRSQEM
201: L
101: PHGYELASER WTPVHTLVET DMFCSILSLY SDCFSNVRGI YKSGLRNTLE DKSIVLSIIS MLSGPNDESP ANVEAAKEWR DNRAEFRKKV SRCVRRSQEM
201: L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.