Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 7
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035819.1-P | Field mustard | cytosol, plastid | 94.48 | 94.48 |
| CDY25375 | Canola | plastid | 93.92 | 93.41 |
| CDY42228 | Canola | plastid | 93.37 | 93.37 |
| CDY24563 | Canola | cytosol, nucleus, peroxisome, plastid | 93.37 | 92.86 |
| Bra038253.1-P | Field mustard | nucleus | 92.82 | 92.82 |
| CDY33445 | Canola | nucleus | 92.82 | 92.82 |
| AT1G50490.1 | Thale cress | plastid | 90.06 | 90.56 |
| KRH24100 | Soybean | cytosol, plastid | 80.11 | 80.56 |
| VIT_06s0061g00070.t01 | Wine grape | cytosol | 78.45 | 80.23 |
| Solyc11g065190.1.1 | Tomato | plastid | 79.01 | 79.01 |
| PGSC0003DMT400080256 | Potato | cytosol, plastid | 77.35 | 78.65 |
| GSMUA_Achr3P08740_001 | Banana | cytosol | 72.38 | 71.98 |
| GSMUA_Achr9P17810_001 | Banana | cytosol | 71.82 | 70.27 |
| TraesCS3A01G186500.1 | Wheat | cytosol, plastid | 69.06 | 67.2 |
| KXG32249 | Sorghum | plastid | 66.3 | 65.22 |
| KRH29075 | Soybean | cytosol, golgi, peroxisome, plastid | 64.64 | 64.64 |
| Os01t0273100-01 | Rice | plastid | 67.96 | 64.4 |
| Zm00001d008260_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 64.64 | 63.93 |
| OQU80782 | Sorghum | nucleus, plastid | 62.98 | 60.64 |
| HORVU3Hr1G038430.3 | Barley | nucleus, plastid | 62.98 | 60.32 |
| TraesCS3D01G190400.2 | Wheat | nucleus, plastid | 63.54 | 59.59 |
| TraesCS3B01G216000.2 | Wheat | plastid | 69.06 | 57.08 |
| Zm00001d008261_P003 | Maize | nucleus | 53.59 | 38.19 |
| AT3G57870.1 | Thale cress | cytosol | 31.49 | 35.62 |
| AT5G59300.1 | Thale cress | nucleus | 30.39 | 33.13 |
| AT3G46460.1 | Thale cress | cytosol | 29.28 | 31.93 |
| AT3G55380.2 | Thale cress | nucleus | 28.73 | 25.87 |
Protein Annotations
| MapMan:13.3.4.1.2 | Gene3D:3.10.110.10 | EntrezGene:821545 | UniProt:A0A178V7W3 | ProteinID:AEE76325.1 | ProteinID:AEE76326.1 |
| ArrayExpress:AT3G20060 | EnsemblPlantsGene:AT3G20060 | RefSeq:AT3G20060 | TAIR:AT3G20060 | RefSeq:AT3G20060-TAIR-G | EnsemblPlants:AT3G20060.1 |
| TAIR:AT3G20060.1 | EMBL:AY127573 | ProteinID:BAB01863.1 | EMBL:BT025536 | EMBL:DQ027033 | GO:GO:0000166 |
| GO:GO:0000209 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008283 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0030071 | GO:GO:0031145 | GO:GO:0031625 | GO:GO:0061630 | InterPro:IPR000608 | InterPro:IPR016135 |
| RefSeq:NP_001078192.1 | RefSeq:NP_566653.1 | ProteinID:OAP01864.1 | PFAM:PF00179 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR44189 | UniProt:Q9LJZ5 |
| SMART:SM00212 | SUPFAM:SSF54495 | Symbol:UBC19 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD |
| UniParc:UPI00000A45BB | SEG:seg | : | : | : | : |
Description
UBC19UBC19 [Source:UniProtKB/TrEMBL;Acc:A0A178V7W3]
Coordinates
chr3:-:7002697..7004508
Molecular Weight (calculated)
19999.7 Da
IEP (calculated)
5.234
GRAVY (calculated)
-0.361
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVNGYTGN TPAATTPAAT GSKQSAPPTK TVDSHSVLKR LQSELMGLMM GADPGISAFP EEDNIFCWKG TITGSKDTVF EGTEYRLSLT FSNDYPFKSP
101: KVKFETCCFH PNVDLYGNIC LDILQDKWSS AYDVRTILLS IQSLLGEPNI SSPLNNQAAQ LWSNQEEYRK MVEKLYKPLN A
101: KVKFETCCFH PNVDLYGNIC LDILQDKWSS AYDVRTILLS IQSLLGEPNI SSPLNNQAAQ LWSNQEEYRK MVEKLYKPLN A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.