Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G186500.1 | Wheat | cytosol, plastid | 84.82 | 87.1 |
| KXG32249 | Sorghum | plastid | 79.06 | 82.07 |
| Zm00001d008260_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 78.01 | 81.42 |
| HORVU3Hr1G038430.3 | Barley | nucleus, plastid | 79.58 | 80.42 |
| TraesCS3D01G190400.2 | Wheat | nucleus, plastid | 79.58 | 78.76 |
| OQU80782 | Sorghum | nucleus, plastid | 76.96 | 78.19 |
| TraesCS3B01G216000.2 | Wheat | plastid | 84.82 | 73.97 |
| GSMUA_Achr9P17810_001 | Banana | cytosol | 71.2 | 73.51 |
| CDY45063 | Canola | cytosol | 48.69 | 72.66 |
| GSMUA_Achr3P08740_001 | Banana | cytosol | 68.06 | 71.43 |
| Bra038253.1-P | Field mustard | nucleus | 67.02 | 70.72 |
| CDY42228 | Canola | plastid | 67.02 | 70.72 |
| Bra030487.1-P | Field mustard | cytosol, plastid | 64.4 | 70.69 |
| CDY29588 | Canola | cytosol, plastid | 64.4 | 70.29 |
| CDY62105 | Canola | cytosol, plastid | 64.4 | 70.29 |
| PGSC0003DMT400080256 | Potato | cytosol, plastid | 65.44 | 70.22 |
| Bra035819.1-P | Field mustard | cytosol, plastid | 66.49 | 70.17 |
| CDY33445 | Canola | nucleus | 65.97 | 69.61 |
| Solyc11g065190.1.1 | Tomato | plastid | 65.97 | 69.61 |
| AT1G50490.1 | Thale cress | plastid | 65.44 | 69.44 |
| CDY25375 | Canola | plastid | 65.97 | 69.23 |
| CDY24563 | Canola | cytosol, nucleus, peroxisome, plastid | 65.97 | 69.23 |
| VIT_06s0061g00070.t01 | Wine grape | cytosol | 63.87 | 68.93 |
| CDY37132 | Canola | cytosol, plastid | 64.92 | 68.51 |
| CDY22799 | Canola | cytosol, plastid | 64.92 | 68.51 |
| Bra018852.1-P | Field mustard | cytosol, plastid | 64.92 | 68.51 |
| AT3G20060.1 | Thale cress | plastid | 64.4 | 67.96 |
| KRH24100 | Soybean | cytosol, plastid | 63.35 | 67.22 |
| Bra014255.1-P | Field mustard | cytosol | 49.74 | 57.93 |
| KRH29075 | Soybean | cytosol, golgi, peroxisome, plastid | 53.93 | 56.91 |
| CDY03608 | Canola | nucleus | 30.37 | 49.15 |
| Zm00001d008261_P003 | Maize | nucleus | 64.92 | 48.82 |
| Os03t0123100-01 | Rice | cytosol | 29.32 | 35.0 |
| Os10t0536000-01 | Rice | cytosol | 28.8 | 34.38 |
| Os05t0460200-01 | Rice | cytosol, nucleus, plastid | 29.84 | 33.73 |
| Os01t0839700-01 | Rice | cytosol, nucleus, plastid | 29.84 | 33.73 |
| Os04t0580400-01 | Rice | cytosol | 18.32 | 25.18 |
Protein Annotations
| MapMan:13.3.4.1.2 | Gene3D:3.10.110.10 | EntrezGene:4325174 | EMBL:AK105320 | ProteinID:BAA90392.1 | ProteinID:BAF04627.1 |
| ProteinID:BAS71518.1 | ProteinID:EAZ11392.1 | GO:GO:0000166 | GO:GO:0000209 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0030071 |
| GO:GO:0031145 | GO:GO:0031625 | GO:GO:0061630 | InterPro:IPR000608 | InterPro:IPR016135 | EnsemblPlantsGene:Os01g0273100 |
| EnsemblPlants:Os01t0273100-01 | PFAM:PF00179 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR44189 | UniProt:Q9LIY1 |
| SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000009CF88 |
| RefSeq:XP_015633764.1 | SEG:seg | : | : | : | : |
Description
UBIQUITIN-CONJUGATING ENZYME 27Similar to Ubiquitin conjugating protein-like (Ubiquitin-conjugating enzyme) (Ubiquitinating enzyme). (Os01t0273100-01)
Coordinates
chr1:+:9445685..9446494
Molecular Weight (calculated)
20200.7 Da
IEP (calculated)
5.678
GRAVY (calculated)
-0.338
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MARGENNTGA HGSGNVPPPA TAASTAAGTA AASGKQQARG AGAEGQSVVR RLQSELMALM MGGDPGVSAF PEGDNIFSWV GTIAGSAATA YEGTSYRLSL
101: AFPGEYPYKP PKVRFETPCF HPNVDAHGNI CLDILQDKWS SAYDVRTILL SIQSLLGEPN NDSPLNTQAA ALWPNQDEFR KMVEKLYKPT A
101: AFPGEYPYKP PKVRFETPCF HPNVDAHGNI CLDILQDKWS SAYDVRTILL SIQSLLGEPN NDSPLNTQAA ALWPNQDEFR KMVEKLYKPT A
001: MATVNGYTGN TPAATTPAAT GSKQSAPPTK TVDSHSVLKR LQSELMGLMM GADPGISAFP EEDNIFCWKG TITGSKDTVF EGTEYRLSLT FSNDYPFKSP
101: KVKFETCCFH PNVDLYGNIC LDILQDKWSS AYDVRTILLS IQSLLGEPNI SSPLNNQAAQ LWSNQEEYRK MVEKLYKPLN A
101: KVKFETCCFH PNVDLYGNIC LDILQDKWSS AYDVRTILLS IQSLLGEPNI SSPLNNQAAQ LWSNQEEYRK MVEKLYKPLN A
Arabidopsis Description
UBC19UBC19 [Source:UniProtKB/TrEMBL;Acc:A0A178V7W3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.