Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 2
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038376_P001 | Maize | extracellular | 96.45 | 96.45 |
| Os01t0839700-01 | Rice | cytosol, nucleus, plastid | 94.08 | 94.08 |
| TraesCS1D01G284200.1 | Wheat | cytosol, nucleus, plastid | 92.31 | 92.31 |
| TraesCS1A01G285200.1 | Wheat | cytosol, nucleus, plastid | 92.31 | 92.31 |
| HORVU1Hr1G072200.2 | Barley | cytosol | 91.72 | 91.72 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 89.94 | 90.48 |
| VIT_08s0007g00120.t01 | Wine grape | mitochondrion | 88.76 | 89.29 |
| KRH29815 | Soybean | cytosol | 87.57 | 89.16 |
| KRH24817 | Soybean | cytosol, nucleus, plastid | 87.57 | 88.62 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 87.57 | 88.1 |
| KRH23052 | Soybean | nucleus | 86.39 | 87.95 |
| KRH10280 | Soybean | nucleus | 86.39 | 87.95 |
| VIT_13s0019g00910.t01 | Wine grape | plastid | 85.8 | 86.31 |
| AT5G59300.1 | Thale cress | nucleus | 84.62 | 86.14 |
| VIT_06s0004g04430.t01 | Wine grape | cytosol, nucleus, plastid | 86.39 | 85.88 |
| AT3G46460.1 | Thale cress | cytosol | 82.84 | 84.34 |
| KXG22164 | Sorghum | cytosol, nucleus, plastid | 85.8 | 84.3 |
| PGSC0003DMT400060478 | Potato | cytosol, nucleus, plastid | 83.43 | 83.93 |
| Solyc04g011430.2.1 | Tomato | cytosol | 81.07 | 83.03 |
| Bra002579.1-P | Field mustard | cytosol | 78.11 | 83.02 |
| CDY02882 | Canola | cytosol, mitochondrion, nucleus | 83.43 | 82.94 |
| PGSC0003DMT400060483 | Potato | cytosol, nucleus, plastid | 83.43 | 82.94 |
| Bra020324.1-P | Field mustard | nucleus | 83.43 | 82.94 |
| Solyc05g054550.2.1 | Tomato | cytosol, nucleus, plastid | 83.43 | 82.94 |
| CDY32651 | Canola | nucleus | 83.43 | 82.94 |
| Bra003210.1-P | Field mustard | nucleus | 81.66 | 82.63 |
| CDY62383 | Canola | nucleus | 81.66 | 82.63 |
| CDY53695 | Canola | nucleus | 81.66 | 82.63 |
| PGSC0003DMT400071311 | Potato | nucleus | 80.47 | 82.42 |
| Bra007157.1-P | Field mustard | nucleus | 80.47 | 81.44 |
| CDY41239 | Canola | nucleus | 80.47 | 81.44 |
| CDY40214 | Canola | nucleus | 80.47 | 81.44 |
| CDY02931 | Canola | cytosol, nucleus, plastid | 79.88 | 80.84 |
| CDX76101 | Canola | cytosol, nucleus, plastid | 79.88 | 80.84 |
| CDY33025 | Canola | cytosol | 78.7 | 80.61 |
| Bra014751.1-P | Field mustard | cytosol, nucleus, plastid | 79.29 | 80.24 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 64.5 | 80.15 |
| Solyc05g054540.2.1 | Tomato | plastid | 80.47 | 80.0 |
| TraesCS1B01G294400.2 | Wheat | plastid | 92.31 | 78.0 |
| PGSC0003DMT400023134 | Potato | nucleus | 76.92 | 77.84 |
| Solyc09g009720.1.1 | Tomato | nucleus | 76.92 | 77.84 |
| CDX80292 | Canola | cytosol | 78.7 | 74.3 |
| Zm00001d010534_P001 | Maize | cytosol | 94.67 | 67.51 |
| AT3G55380.2 | Thale cress | nucleus | 78.7 | 66.17 |
| Os03t0123100-01 | Rice | cytosol | 30.18 | 31.88 |
| Os04t0580400-01 | Rice | cytosol | 25.44 | 30.94 |
| Os10t0536000-01 | Rice | cytosol | 28.4 | 30.0 |
| Os01t0273100-01 | Rice | plastid | 33.73 | 29.84 |
Protein Annotations
| MapMan:19.2.2.1.6.1.1 | MapMan:19.2.4.1.2 | Gene3D:3.10.110.10 | EntrezGene:4339013 | ProteinID:AAT39166.1 | EMBL:AK098861 |
| EMBL:AK111857 | EMBL:AK111999 | ProteinID:BAF17669.1 | ProteinID:BAS94401.1 | ProteinID:EEE63985.1 | GO:GO:0000166 |
| GO:GO:0000209 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0031625 | GO:GO:0061630 | InterPro:IPR000608 | InterPro:IPR016135 | EnsemblPlantsGene:Os05g0460200 | EnsemblPlants:Os05t0460200-01 |
| PFAM:PF00179 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR24067 | PANTHER:PTHR24067:SF237 | UniProt:Q6L508 |
| SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0000378056 |
| RefSeq:XP_015640551.1 | SEG:seg | : | : | : | : |
Description
UBIQUITIN-CONJUGATING ENZYME 12Similar to Ubiquitin carrier protein. (Os05t0460200-01)
Coordinates
chr5:+:22615894..22620207
Molecular Weight (calculated)
18979.4 Da
IEP (calculated)
4.988
GRAVY (calculated)
-0.447
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAASQASL LLQKQLKDLA KNPVDGFSAG LVDDSNVFEW QVTIIGPPDT LYDGGYFNAI MTFPQNYPNS PPSVRFTSEM WHPNVYPDGR VCISILHPPG
101: EDPNGYELAS ERWTPVHTVE SIVLSIISML SSPNDESPAN IEAAKDWREK RDDFKKKVRR IVRKSQEML
101: EDPNGYELAS ERWTPVHTVE SIVLSIISML SSPNDESPAN IEAAKDWREK RDDFKKKVRR IVRKSQEML
001: MASQASLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFNAIMTF PQNYPNSPPT VRFTSDMWHP NVYSDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
Arabidopsis Description
UBC7Ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:Q42540]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.