Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0460200-01 | Rice | cytosol, nucleus, plastid | 96.45 | 96.45 |
| TraesCS1A01G285200.1 | Wheat | cytosol, nucleus, plastid | 92.31 | 92.31 |
| TraesCS1D01G284200.1 | Wheat | cytosol, nucleus, plastid | 92.31 | 92.31 |
| HORVU1Hr1G072200.2 | Barley | cytosol | 91.72 | 91.72 |
| Zm00001d012421_P003 | Maize | cytosol, nucleus, plastid | 91.12 | 91.12 |
| VIT_08s0007g00120.t01 | Wine grape | mitochondrion | 89.35 | 89.88 |
| KRH29815 | Soybean | cytosol | 88.17 | 89.76 |
| KRH23052 | Soybean | nucleus | 88.17 | 89.76 |
| KRH10280 | Soybean | nucleus | 88.17 | 89.76 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 88.76 | 89.29 |
| KRH24817 | Soybean | cytosol, nucleus, plastid | 88.17 | 89.22 |
| Zm00001d042929_P001 | Maize | cytosol, nucleus, plastid | 88.76 | 88.76 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 88.17 | 88.69 |
| AT5G59300.1 | Thale cress | nucleus | 86.39 | 87.95 |
| VIT_13s0019g00910.t01 | Wine grape | plastid | 86.98 | 87.5 |
| VIT_06s0004g04430.t01 | Wine grape | cytosol, nucleus, plastid | 87.57 | 87.06 |
| AT3G46460.1 | Thale cress | cytosol | 84.62 | 86.14 |
| Bra020324.1-P | Field mustard | nucleus | 85.21 | 84.71 |
| CDY32651 | Canola | nucleus | 85.21 | 84.71 |
| CDY02882 | Canola | cytosol, mitochondrion, nucleus | 85.21 | 84.71 |
| PGSC0003DMT400060478 | Potato | cytosol, nucleus, plastid | 84.02 | 84.52 |
| KXG22164 | Sorghum | cytosol, nucleus, plastid | 85.8 | 84.3 |
| Bra002579.1-P | Field mustard | cytosol | 79.29 | 84.28 |
| Solyc04g011430.2.1 | Tomato | cytosol | 82.25 | 84.24 |
| Solyc05g054550.2.1 | Tomato | cytosol, nucleus, plastid | 84.62 | 84.12 |
| PGSC0003DMT400071311 | Potato | nucleus | 81.66 | 83.64 |
| PGSC0003DMT400060483 | Potato | cytosol, nucleus, plastid | 84.02 | 83.53 |
| CDY53695 | Canola | nucleus | 81.66 | 82.63 |
| Bra003210.1-P | Field mustard | nucleus | 81.66 | 82.63 |
| CDY62383 | Canola | nucleus | 81.66 | 82.63 |
| CDY33025 | Canola | cytosol | 79.88 | 81.82 |
| CDY02931 | Canola | cytosol, nucleus, plastid | 79.88 | 80.84 |
| CDY40214 | Canola | nucleus | 79.88 | 80.84 |
| CDX76101 | Canola | cytosol, nucleus, plastid | 79.88 | 80.84 |
| CDY41239 | Canola | nucleus | 79.88 | 80.84 |
| Bra007157.1-P | Field mustard | nucleus | 79.88 | 80.84 |
| Solyc05g054540.2.1 | Tomato | plastid | 81.07 | 80.59 |
| Bra014751.1-P | Field mustard | cytosol, nucleus, plastid | 79.29 | 80.24 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 63.91 | 79.41 |
| PGSC0003DMT400023134 | Potato | nucleus | 77.51 | 78.44 |
| Solyc09g009720.1.1 | Tomato | nucleus | 77.51 | 78.44 |
| TraesCS1B01G294400.2 | Wheat | plastid | 92.31 | 78.0 |
| CDX80292 | Canola | cytosol | 79.88 | 75.42 |
| Zm00001d010534_P001 | Maize | cytosol | 95.86 | 68.35 |
| AT3G55380.2 | Thale cress | nucleus | 78.7 | 66.17 |
| Zm00001d040631_P001 | Maize | cytosol | 62.13 | 46.26 |
| Zm00001d027427_P001 | Maize | nucleus | 30.77 | 32.5 |
| Zm00001d047354_P001 | Maize | nucleus | 29.59 | 31.25 |
| Zm00001d048473_P003 | Maize | nucleus | 29.59 | 31.25 |
| Zm00001d002570_P001 | Maize | mitochondrion, nucleus | 28.99 | 30.82 |
| Zm00001d008260_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 31.95 | 29.51 |
| Zm00001d029740_P002 | Maize | nucleus | 27.81 | 29.38 |
| Zm00001d009034_P002 | Maize | nucleus | 47.93 | 20.93 |
| Zm00001d008383_P001 | Maize | plastid | 26.63 | 19.57 |
| Zm00001d008261_P003 | Maize | nucleus | 27.22 | 18.11 |
| Zm00001d002572_P002 | Maize | cytosol, golgi, mitochondrion, nucleus | 31.95 | 16.67 |
| Zm00001d029705_P032 | Maize | plasma membrane | 30.18 | 9.38 |
| Zm00001d005779_P153 | Maize | plasma membrane | 21.3 | 6.0 |
Protein Annotations
| MapMan:19.2.2.1.6.1.1 | MapMan:19.2.4.1.2 | Gene3D:3.10.110.10 | EntrezGene:542600 | EMBL:AF032468 | ProteinID:AQK86478.1 |
| EMBL:BT037704 | EMBL:EU976665 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0016740 | InterPro:IPR000608 | InterPro:IPR016135 | UniProt:O22656 | PFAM:PF00179 |
| ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR24067 | PANTHER:PTHR24067:SF237 | SMART:SM00212 | SUPFAM:SSF54495 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000009EE32 | EnsemblPlantsGene:Zm00001d038376 | EnsemblPlants:Zm00001d038376_P001 |
| EnsemblPlants:Zm00001d038376_T001 | SEG:seg | : | : | : | : |
Description
ubiquitin carrier protein 7
Coordinates
chr6:+:155902916..155911076
Molecular Weight (calculated)
18971.4 Da
IEP (calculated)
4.810
GRAVY (calculated)
-0.467
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSASQASL LLQKQLKDLA KNPVDGFSAG LVDDSNIFEW QVTIIGPPDT LYDGGYFNAI MTFPQNYPNS PPSVRFTSEM WHPNVYPDGR VCISILHPPG
101: EDPNGYELAS ERWTPVHTVE SIVLSIISML SSPNDESPAN IEAAKDWREK RDEFKKKVRQ CVRKSQEML
101: EDPNGYELAS ERWTPVHTVE SIVLSIISML SSPNDESPAN IEAAKDWREK RDEFKKKVRQ CVRKSQEML
001: MELCKCSEGG FFYAIMSFPQ NYPNSPPTVR FTSDIWHPNV YPDGRVCISI LHPPGDDPSG YELASERWTP VHTVESIMLS IISMLSGPND ESPANVEAAK
101: EWREKRDEFK KKVSRCVRKS QEMF
101: EWREKRDEFK KKVSRCVRKS QEMF
Arabidopsis Description
UBC13UBC13 [Source:UniProtKB/TrEMBL;Acc:A0A178V960]
SUBAcon: [extracellular,nucleus,cytosol]
SUBAcon: [extracellular,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.