Factsheet for Zm00001d002572_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, nucleus, cytosol

Predictor Summary:

golgi 1
mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, mitochondrion, nucleus
Any Predictor:	cytosol, golgi, mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12705	Sorghum	mitochondrion	46.6	94.97
Zm00001d002570_P001	Maize	mitochondrion, nucleus	38.89	79.25
Zm00001d027427_P001	Maize	nucleus	34.57	70.0
Zm00001d048473_P003	Maize	nucleus	34.26	69.38
Zm00001d047354_P001	Maize	nucleus	34.26	69.38
TraesCS2B01G413400.1	Wheat	peroxisome	33.95	69.18
Solyc03g112720.2.1	Tomato	nucleus	29.32	63.76
PGSC0003DMT400046775	Potato	nucleus	31.48	63.35
Zm00001d029740_P002	Maize	nucleus	31.17	63.12
TraesCS2A01G395300.2	Wheat	endoplasmic reticulum, extracellular	31.48	58.62
TraesCS2D01G393100.2	Wheat	endoplasmic reticulum	31.48	58.62
Os04t0580400-01	Rice	cytosol	24.07	56.12
HORVU2Hr1G094030.8	Barley	nucleus, plastid	35.8	53.7
CDX73361	Canola	extracellular	11.11	39.13
Zm00001d012421_P003	Maize	cytosol, nucleus, plastid	16.67	31.95
Zm00001d038376_P001	Maize	extracellular	16.67	31.95
Zm00001d042929_P001	Maize	cytosol, nucleus, plastid	16.67	31.95
Zm00001d008260_P001	Maize	cytosol, mitochondrion, nucleus, plastid	16.05	28.42
Zm00001d010534_P001	Maize	cytosol	16.36	22.36
Zm00001d040631_P001	Maize	cytosol	13.89	19.82
Zm00001d008261_P003	Maize	nucleus	13.89	17.72
Zm00001d008383_P001	Maize	plastid	10.49	14.78
Zm00001d009034_P002	Maize	nucleus	12.35	10.34
Zm00001d029705_P032	Maize	plasma membrane	12.35	7.35
Zm00001d005779_P153	Maize	plasma membrane	8.95	4.83

Protein Annotations

EntrezGene:100304088	MapMan:19.2.2.2.3	Gene3D:3.10.110.10	UniProt:A0A1D6E1Y7	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016925	GO:GO:0019538	GO:GO:0019789	InterPro:IPR000608
InterPro:IPR016135	ProteinID:ONM14677.1	PFAM:PF00179	PFscan:PS50127	PANTHER:PTHR43927	PANTHER:PTHR43927:SF2
SMART:SM00212	SUPFAM:SSF54495	TMHMM:TMhelix	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000843BCBA
InterPro:Ubc9	EnsemblPlantsGene:Zm00001d002572	EnsemblPlants:Zm00001d002572_P002	EnsemblPlants:Zm00001d002572_T002	SEG:seg	:

Description

Ubiquitin-conjugating enzyme E2 I

Coordinates

chr2:+:15665850..15669829

Molecular Weight (calculated)

36651.4 Da

IEP (calculated)

10.384

GRAVY (calculated)

-0.234

Length

324 amino acids

Sequence
(BLAST)

001: MASGGAARGR LAEERKAWRK SHPLVGTVIL SASSLLLGFV AKPAMLPDGS VNLMLWNCVV PGKEGKKNNF SLLSQNRNKQ SIIRFSEFMS GILSSVQQLA
101: NQLADAHFAR PHPTIHTSSR SQMPQNVQSA MRLRVLSFLW ERMHIRIREP LDTGAFSVAQ TRAATREMRF RIRPPLDTNT TILLNLLLET KTRDMLYYGN
201: HTIKLFCFLA LAAKRGLTDW EGGYFPVTLH FTENYPSNPP TCKFPRRFFH VNVYDSGDVC LSILGDAWAP SITVRQILIG IQELLENPNP ASPAQDFAYD
301: VFAENMPEYK RRVREQAKRY PSLV

Best Arabidopsis Sequence Match ( AT3G57870.1 )
(BLAST)

001: MASGIARGRL AEERKSWRKN HPHGFVAKPE TGQDGTVNLM VWHCTIPGKA GTDWEGGFFP LTMHFSEDYP SKPPKCKFPQ GFFHPNVYPS GTVCLSILNE
101: DYGWRPAITV KQILVGIQDL LDTPNPADPA QTDGYHLFCQ DPVEYKKRVK LQSKQYPALV

Arabidopsis Description

SCE1SCE1A [Source:UniProtKB/TrEMBL;Acc:A0A178V9H0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.