Factsheet for Zm00001d009034_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029705_P032	Maize	plasma membrane	82.95	59.01
GSMUA_Achr5P08370_001	Banana	cytosol	17.31	49.26
GSMUA_Achr6P34220_001	Banana	plastid	20.93	48.21
Zm00001d012421_P003	Maize	cytosol, nucleus, plastid	20.93	47.93
Zm00001d038376_P001	Maize	extracellular	20.93	47.93
TraesCS3D01G351600.1	Wheat	cytosol, nucleus, plastid	20.93	47.93
TraesCS3B01G390400.1	Wheat	cytosol, nucleus, plastid	20.93	47.93
TraesCS3A01G357700.1	Wheat	cytosol, nucleus, plastid	20.93	47.93
EES03856	Sorghum	cytosol, nucleus, plastid	20.93	47.93
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	20.67	47.62
VIT_08s0007g00120.t01	Wine grape	mitochondrion	20.41	47.02
KRH29815	Soybean	cytosol	20.16	46.99
Os01t0839700-01	Rice	cytosol, nucleus, plastid	20.41	46.75
KRH24817	Soybean	cytosol, nucleus, plastid	20.16	46.71
KRH10280	Soybean	nucleus	19.64	45.78
KRH23052	Soybean	nucleus	19.64	45.78
Zm00001d042929_P001	Maize	cytosol, nucleus, plastid	19.9	45.56
VIT_06s0004g04430.t01	Wine grape	cytosol, nucleus, plastid	19.9	45.29
PGSC0003DMT400060478	Potato	cytosol, nucleus, plastid	19.38	44.64
Solyc05g054550.2.1	Tomato	cytosol, nucleus, plastid	19.38	44.12
PGSC0003DMT400060483	Potato	cytosol, nucleus, plastid	19.12	43.53
VIT_13s0019g00910.t01	Wine grape	plastid	18.86	43.45
Solyc04g011430.2.1	Tomato	cytosol	18.35	43.03
PGSC0003DMT400071311	Potato	nucleus	18.35	43.03
AT3G46460.1	Thale cress	cytosol	18.35	42.77
AT5G59300.1	Thale cress	nucleus	18.35	42.77
Bra002579.1-P	Field mustard	cytosol	17.57	42.77
CDY40214	Canola	nucleus	18.35	42.52
Bra007157.1-P	Field mustard	nucleus	18.35	42.52
CDY33025	Canola	cytosol	18.09	42.42
CDX76101	Canola	cytosol, nucleus, plastid	18.09	41.92
CDY53695	Canola	nucleus	18.09	41.92
CDY62383	Canola	nucleus	18.09	41.92
CDY41239	Canola	nucleus	18.09	41.92
Bra003210.1-P	Field mustard	nucleus	18.09	41.92
Bra014751.1-P	Field mustard	cytosol, nucleus, plastid	18.09	41.92
Solyc09g009720.1.1	Tomato	nucleus	18.09	41.92
CDY02931	Canola	cytosol, nucleus, plastid	18.09	41.92
PGSC0003DMT400023134	Potato	nucleus	18.09	41.92
Bra020324.1-P	Field mustard	nucleus	18.35	41.76
Solyc05g054540.2.1	Tomato	plastid	18.35	41.76
CDY32651	Canola	nucleus	18.35	41.76
CDY02882	Canola	cytosol, mitochondrion, nucleus	18.35	41.76
CDX80292	Canola	cytosol	17.57	37.99
Zm00001d005779_P153	Maize	plasma membrane	57.11	36.83
AT3G55380.2	Thale cress	nucleus	18.35	35.32
Zm00001d010534_P001	Maize	cytosol	20.93	34.18
Zm00001d040631_P001	Maize	cytosol	19.64	33.48
HORVU3Hr1G086540.2	Barley	endoplasmic reticulum, golgi, plastid	20.93	32.02
Zm00001d048473_P003	Maize	nucleus	10.59	25.62
Zm00001d027427_P001	Maize	nucleus	10.34	25.0
Zm00001d047354_P001	Maize	nucleus	10.08	24.38
Zm00001d002570_P001	Maize	mitochondrion, nucleus	9.3	22.64
Zm00001d029740_P002	Maize	nucleus	9.3	22.5
Zm00001d008260_P001	Maize	cytosol, mitochondrion, nucleus, plastid	9.56	20.22
Zm00001d008261_P003	Maize	nucleus	9.04	13.78
Zm00001d008383_P001	Maize	plastid	8.01	13.48
Zm00001d002572_P002	Maize	cytosol, golgi, mitochondrion, nucleus	10.34	12.35

Protein Annotations

KEGG:00230+2.7.7.7	KEGG:00240+2.7.7.7	Gene3D:1.10.150.20	Gene3D:3.10.110.10	Gene3D:3.30.70.370	Gene3D:3.40.50.2300
MapMan:35.1	UniProt:A0A1D6FHD1	ProteinID:AQK91247.1	InterPro:CheY-like_superfamily	InterPro:DNA-dir_DNA_pol_A_palm_dom	InterPro:DNA_polymerase_A
GO:GO:0000160	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824
GO:GO:0003887	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0006259	GO:GO:0006260	GO:GO:0006261	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0071897
InterPro:IPR000608	InterPro:IPR001789	InterPro:IPR016135	PFAM:PF00072	PFAM:PF00179	PFAM:PF00476
ScanProsite:PS00183	PFscan:PS50110	PFscan:PS50127	PANTHER:PTHR10133	PANTHER:PTHR10133:SF50	SMART:SM00212
SUPFAM:SSF52172	SUPFAM:SSF54495	SUPFAM:SSF56672	InterPro:Sig_transdc_resp-reg_receiver	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_AS
InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0008454F84	EnsemblPlantsGene:Zm00001d009034	EnsemblPlants:Zm00001d009034_P002	EnsemblPlants:Zm00001d009034_T002	:

Description

ubiquitin carrier protein 7

Coordinates

chr8:-:30866005..30874437

Molecular Weight (calculated)

43716.2 Da

IEP (calculated)

8.417

GRAVY (calculated)

-0.506

Length

387 amino acids

Sequence
(BLAST)

001: MRVLAVDDDP TCLKVLENLL FRCQYHGTSL DNNGTGSHGP ELLREKKDQF DLVISNVHMP DMDGFKLLEL VGLEMDLPGI SLVCDGGYFN AIMSFPQNYP
101: NSPPSVRFTS EMWHPNVYPD GRVCISILHP PSEDPNGYEL ASSPSPLCPT GTKQPMELEH PMDDFHSPAA NSPNCFDPST QSACTQPVVA ANSDRVRKPE
201: GRGAWLTRNG RQDTAGGSLQ PHAWWPVWEG AHCSSSDDFR NFSGQEGKGN DRKVRRVRGV QIWMRAEKRS RKIFVKEAKD TLKLWYSNRK KVLAWQVKQK
301: QLAHEKCEFY TLLWRSRRVL NMAHATRRFL NMAHATFGQR GHIKHAAINA PVQGTAADVA MCAMLEIDRN TRLKELGWAL LMWVVYA

Best Arabidopsis Sequence Match ( AT3G46460.2 )
(BLAST)

001: MELCKCSEGG FFYAIMSFPQ NYPNSPPTVR FTSDIWHPNV YPDGRVCISI LHPPGDDPSG YELASERWTP VHTVESIMLS IISMLSGPND ESPANVEAAK
101: EWREKRDEFK KKVSRCVRKS QEMF

Arabidopsis Description

UBC13UBC13 [Source:UniProtKB/TrEMBL;Acc:A0A178V960]
SUBAcon: [extracellular,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.