Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002579.1-P | Field mustard | cytosol | 93.33 | 96.86 |
| AT3G46460.1 | Thale cress | cytosol | 90.3 | 89.76 |
| CDY32651 | Canola | nucleus | 87.88 | 85.29 |
| CDY02882 | Canola | cytosol, mitochondrion, nucleus | 87.88 | 85.29 |
| CDX80292 | Canola | cytosol | 92.12 | 84.92 |
| KRH10280 | Soybean | nucleus | 84.85 | 84.34 |
| KRH23052 | Soybean | nucleus | 84.85 | 84.34 |
| KRH29815 | Soybean | cytosol | 83.64 | 83.13 |
| KRH24817 | Soybean | cytosol, nucleus, plastid | 83.64 | 82.63 |
| Os01t0839700-01 | Rice | cytosol, nucleus, plastid | 84.24 | 82.25 |
| CDY53695 | Canola | nucleus | 82.42 | 81.44 |
| CDY62383 | Canola | nucleus | 82.42 | 81.44 |
| TraesCS3A01G357700.1 | Wheat | cytosol, nucleus, plastid | 83.03 | 81.07 |
| TraesCS3B01G390400.1 | Wheat | cytosol, nucleus, plastid | 83.03 | 81.07 |
| TraesCS3D01G351600.1 | Wheat | cytosol, nucleus, plastid | 83.03 | 81.07 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 82.42 | 80.95 |
| EES03856 | Sorghum | cytosol, nucleus, plastid | 81.82 | 79.88 |
| Zm00001d038376_P001 | Maize | extracellular | 81.82 | 79.88 |
| Zm00001d012421_P003 | Maize | cytosol, nucleus, plastid | 81.21 | 79.29 |
| CDY02931 | Canola | cytosol, nucleus, plastid | 80.0 | 79.04 |
| CDX76101 | Canola | cytosol, nucleus, plastid | 80.0 | 79.04 |
| CDY40214 | Canola | nucleus | 80.0 | 79.04 |
| CDY41239 | Canola | nucleus | 80.0 | 79.04 |
| VIT_06s0004g04430.t01 | Wine grape | cytosol, nucleus, plastid | 81.21 | 78.82 |
| Os05t0460200-01 | Rice | cytosol, nucleus, plastid | 80.61 | 78.7 |
| Zm00001d042929_P001 | Maize | cytosol, nucleus, plastid | 80.61 | 78.7 |
| TraesCS1A01G285200.1 | Wheat | cytosol, nucleus, plastid | 79.39 | 77.51 |
| TraesCS1D01G284200.1 | Wheat | cytosol, nucleus, plastid | 79.39 | 77.51 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 78.79 | 77.38 |
| HORVU1Hr1G072200.2 | Barley | cytosol | 78.79 | 76.92 |
| PGSC0003DMT400023134 | Potato | nucleus | 76.36 | 75.45 |
| Solyc09g009720.1.1 | Tomato | nucleus | 76.36 | 75.45 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 57.58 | 69.85 |
| KXG22164 | Sorghum | cytosol, nucleus, plastid | 70.3 | 67.44 |
| TraesCS1B01G294400.2 | Wheat | plastid | 79.39 | 65.5 |
| Zm00001d010534_P001 | Maize | cytosol | 81.21 | 56.54 |
| GSMUA_Achr5P08330_001 | Banana | extracellular, golgi, vacuole | 32.12 | 55.79 |
| HORVU3Hr1G086540.2 | Barley | endoplasmic reticulum, golgi, plastid | 83.03 | 54.15 |
| Zm00001d040631_P001 | Maize | cytosol | 59.39 | 43.17 |
| CDY45063 | Canola | cytosol | 27.88 | 35.94 |
| CDX73361 | Canola | extracellular | 20.0 | 35.87 |
| CDX88967 | Canola | cytosol | 30.3 | 31.25 |
| CDX98253 | Canola | cytosol | 30.3 | 31.25 |
| CDX67711 | Canola | cytosol | 30.3 | 31.25 |
| CDY70581 | Canola | cytosol | 30.3 | 31.25 |
| CDY47661 | Canola | cytosol | 29.7 | 30.62 |
| CDX71988 | Canola | nucleus | 29.09 | 30.0 |
| CDY62105 | Canola | cytosol, plastid | 30.91 | 29.14 |
| CDY29588 | Canola | cytosol, plastid | 30.91 | 29.14 |
| CDY22799 | Canola | cytosol, plastid | 30.91 | 28.18 |
| CDY37132 | Canola | cytosol, plastid | 30.91 | 28.18 |
| CDY42228 | Canola | plastid | 30.91 | 28.18 |
| CDX93982 | Canola | cytosol | 27.27 | 28.12 |
| CDY66302 | Canola | cytosol | 27.27 | 28.12 |
| CDY24563 | Canola | cytosol, nucleus, peroxisome, plastid | 30.91 | 28.02 |
| CDY25375 | Canola | plastid | 30.91 | 28.02 |
| CDY33445 | Canola | nucleus | 30.3 | 27.62 |
| CDY03608 | Canola | nucleus | 18.79 | 26.27 |
| Zm00001d009034_P002 | Maize | nucleus | 42.42 | 18.09 |
| Zm00001d008383_P001 | Maize | plastid | 24.85 | 17.83 |
| Zm00001d029705_P032 | Maize | plasma membrane | 27.88 | 8.46 |
| Zm00001d005779_P153 | Maize | plasma membrane | 19.39 | 5.33 |
Protein Annotations
| MapMan:19.2.2.1.6.1.1 | MapMan:19.2.4.1.2 | Gene3D:3.10.110.10 | GO:A0A078H360 | UniProt:A0A078H360 | EnsemblPlants:CDY33025 |
| ProteinID:CDY33025 | ProteinID:CDY33025.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00053251001 | InterPro:IPR000608 | InterPro:IPR016135 | PFAM:PF00179 |
| ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR24067 | PANTHER:PTHR24067:SF237 | MetaCyc:PWY-7511 | SMART:SM00212 |
| SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniPathway:UPA00143 | UniParc:UPI0004EDD939 |
| SEG:seg | : | : | : | : | : |
Description
BnaA10g12310DBnaA10g12310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H360]
Coordinates
chrLK032304:-:306467..307847
Molecular Weight (calculated)
18733.3 Da
IEP (calculated)
5.259
GRAVY (calculated)
-0.352
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLTRVIRNF SIIDLCKHPV DGFSAGLVDE KNIFEWNVTI IGPPDTLYEG GFFNAIMSFP QNYPNSPPTV RFTSDMWHPN VYSDGRVCIS ILHPPGDDPS
101: GYELASERWT PVHTVESIML SIISMLSGPN DESPANVEAA KEWREKRDEF KKKVSRCVRK SQEML
101: GYELASERWT PVHTVESIML SIISMLSGPN DESPANVEAA KEWREKRDEF KKKVSRCVRK SQEML
001: MASQASLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFNAIMTF PQNYPNSPPT VRFTSDMWHP NVYSDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWRDKRDE FKKKVSRCVR KSQEMF
Arabidopsis Description
UBC7Ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:Q42540]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.