Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 2
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014751.1-P | Field mustard | cytosol, nucleus, plastid | 99.4 | 99.4 |
| CDY02931 | Canola | cytosol, nucleus, plastid | 99.4 | 99.4 |
| CDY62383 | Canola | nucleus | 96.41 | 96.41 |
| CDY53695 | Canola | nucleus | 96.41 | 96.41 |
| CDY40214 | Canola | nucleus | 90.42 | 90.42 |
| CDY41239 | Canola | nucleus | 89.22 | 89.22 |
| PGSC0003DMT400060483 | Potato | cytosol, nucleus, plastid | 89.82 | 88.24 |
| PGSC0003DMT400060478 | Potato | cytosol, nucleus, plastid | 88.62 | 88.1 |
| Solyc05g054550.2.1 | Tomato | cytosol, nucleus, plastid | 88.62 | 87.06 |
| VIT_13s0019g00910.t01 | Wine grape | plastid | 86.83 | 86.31 |
| Solyc05g054540.2.1 | Tomato | plastid | 86.83 | 85.29 |
| Solyc04g011430.2.1 | Tomato | cytosol | 83.83 | 84.85 |
| PGSC0003DMT400071311 | Potato | nucleus | 83.23 | 84.24 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 84.43 | 83.93 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 82.63 | 82.14 |
| CDY32651 | Canola | nucleus | 83.23 | 81.76 |
| Os01t0839700-01 | Rice | cytosol, nucleus, plastid | 82.63 | 81.66 |
| CDY02882 | Canola | cytosol, mitochondrion, nucleus | 82.63 | 81.18 |
| CDY33025 | Canola | cytosol | 79.04 | 80.0 |
| Zm00001d038376_P001 | Maize | extracellular | 80.84 | 79.88 |
| TraesCS1D01G284200.1 | Wheat | cytosol, nucleus, plastid | 80.84 | 79.88 |
| TraesCS1A01G285200.1 | Wheat | cytosol, nucleus, plastid | 80.84 | 79.88 |
| Os05t0460200-01 | Rice | cytosol, nucleus, plastid | 80.84 | 79.88 |
| TraesCS3D01G351600.1 | Wheat | cytosol, nucleus, plastid | 80.24 | 79.29 |
| TraesCS3B01G390400.1 | Wheat | cytosol, nucleus, plastid | 80.24 | 79.29 |
| TraesCS3A01G357700.1 | Wheat | cytosol, nucleus, plastid | 80.24 | 79.29 |
| HORVU1Hr1G072200.2 | Barley | cytosol | 80.24 | 79.29 |
| Zm00001d012421_P003 | Maize | cytosol, nucleus, plastid | 79.64 | 78.7 |
| EES03856 | Sorghum | cytosol, nucleus, plastid | 79.64 | 78.7 |
| Zm00001d042929_P001 | Maize | cytosol, nucleus, plastid | 79.04 | 78.11 |
| AT3G55380.2 | Thale cress | nucleus | 92.22 | 76.62 |
| CDX80292 | Canola | cytosol | 79.04 | 73.74 |
| KXG22164 | Sorghum | cytosol, nucleus, plastid | 74.25 | 72.09 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 57.48 | 70.59 |
| TraesCS1B01G294400.2 | Wheat | plastid | 80.84 | 67.5 |
| Zm00001d010534_P001 | Maize | cytosol | 80.84 | 56.96 |
| GSMUA_Achr5P08330_001 | Banana | extracellular, golgi, vacuole | 31.74 | 55.79 |
| HORVU3Hr1G086540.2 | Barley | endoplasmic reticulum, golgi, plastid | 80.24 | 52.96 |
| Zm00001d040631_P001 | Maize | cytosol | 55.69 | 40.97 |
| CDY45063 | Canola | cytosol | 29.94 | 39.06 |
| CDX73361 | Canola | extracellular | 20.36 | 36.96 |
| CDX67711 | Canola | cytosol | 32.34 | 33.75 |
| CDX88967 | Canola | cytosol | 32.34 | 33.75 |
| CDX98253 | Canola | cytosol | 32.34 | 33.75 |
| CDY70581 | Canola | cytosol | 32.34 | 33.75 |
| CDY47661 | Canola | cytosol | 31.74 | 33.12 |
| CDY62105 | Canola | cytosol, plastid | 34.13 | 32.57 |
| CDY29588 | Canola | cytosol, plastid | 34.13 | 32.57 |
| CDX71988 | Canola | nucleus | 31.14 | 32.5 |
| CDY42228 | Canola | plastid | 34.73 | 32.04 |
| CDY37132 | Canola | cytosol, plastid | 34.13 | 31.49 |
| CDY33445 | Canola | nucleus | 34.13 | 31.49 |
| CDY22799 | Canola | cytosol, plastid | 34.13 | 31.49 |
| CDY24563 | Canola | cytosol, nucleus, peroxisome, plastid | 34.13 | 31.32 |
| CDY25375 | Canola | plastid | 34.13 | 31.32 |
| CDX93982 | Canola | cytosol | 28.74 | 30.0 |
| CDY66302 | Canola | cytosol | 28.74 | 30.0 |
| CDY03608 | Canola | nucleus | 20.96 | 29.66 |
| Zm00001d008383_P001 | Maize | plastid | 26.35 | 19.13 |
| Zm00001d009034_P002 | Maize | nucleus | 41.92 | 18.09 |
| Zm00001d029705_P032 | Maize | plasma membrane | 29.34 | 9.01 |
| Zm00001d005779_P153 | Maize | plasma membrane | 19.76 | 5.5 |
Protein Annotations
| MapMan:19.2.2.1.6.1.1 | MapMan:19.2.4.1.2 | Gene3D:3.10.110.10 | GO:A0A078CG07 | EnsemblPlants:CDX76101 | ProteinID:CDX76101 |
| ProteinID:CDX76101.1 | EnsemblPlantsGene:GSBRNA2T00126370001 | InterPro:IPR000608 | InterPro:IPR016135 | PFAM:PF00179 | ScanProsite:PS00183 |
| PFscan:PS50127 | PANTHER:PTHR24067 | PANTHER:PTHR24067:SF174 | MetaCyc:PWY-7511 | SMART:SM00212 | SUPFAM:SSF54495 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniPathway:UPA00143 | UniParc:UPI0004EEAC72 | SEG:seg |
Description
BnaA04g03650D
Coordinates
chrLK031806:-:835613..837074
Molecular Weight (calculated)
18784.3 Da
IEP (calculated)
5.709
GRAVY (calculated)
-0.471
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKNQASLLL QKQLKDLCKK PVDGFSAGLV DENNVFQWSV SIMGPPDTLY EGGFFNAIMT FPQDYPNKPP TVKFTSEVWH PNVYSDGKVC ISILHPPGDD
101: PNGYELASER WNPVHTVESI VLSIISMLSG PNDESPANVE AAKEWRDNRA EFRKKVSRCV RRSQEML
101: PNGYELASER WNPVHTVESI VLSIISMLSG PNDESPANVE AAKEWRDNRA EFRKKVSRCV RRSQEML
001: MANNQASLLL QKQLKDLCKK PVDGFSAGLV DEKNVFQWSV SIMGPPDTLY EGGFFNAIMS FPENYPVSPP TVTFTSEMWH PNVYSDGKVC ISILHPPGDD
101: PHGYELASER WTPVHTVESI VLSIISMLSG PNDESPANVE AAKEWRDNRA EFRKKVSRCV RRSQEML
101: PHGYELASER WTPVHTVESI VLSIISMLSG PNDESPANVE AAKEWRDNRA EFRKKVSRCV RRSQEML
Arabidopsis Description
UBC14Ubiquitin-conjugating enzyme 14 [Source:UniProtKB/TrEMBL;Acc:F4IWU7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.