Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- mitochondrion 2
- cytosol 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003210.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY62383 | Canola | nucleus | 100.0 | 100.0 |
| CDX76101 | Canola | cytosol, nucleus, plastid | 96.41 | 96.41 |
| CDY02931 | Canola | cytosol, nucleus, plastid | 95.81 | 95.81 |
| CDY40214 | Canola | nucleus | 91.62 | 91.62 |
| CDY41239 | Canola | nucleus | 91.62 | 91.62 |
| PGSC0003DMT400060478 | Potato | cytosol, nucleus, plastid | 87.43 | 86.9 |
| VIT_13s0019g00910.t01 | Wine grape | plastid | 87.43 | 86.9 |
| PGSC0003DMT400060483 | Potato | cytosol, nucleus, plastid | 88.02 | 86.47 |
| Solyc04g011430.2.1 | Tomato | cytosol | 85.03 | 86.06 |
| Solyc05g054550.2.1 | Tomato | cytosol, nucleus, plastid | 87.43 | 85.88 |
| PGSC0003DMT400071311 | Potato | nucleus | 84.43 | 85.45 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 85.03 | 84.52 |
| Os01t0839700-01 | Rice | cytosol, nucleus, plastid | 85.03 | 84.02 |
| CDY02882 | Canola | cytosol, mitochondrion, nucleus | 85.03 | 83.53 |
| Solyc05g054540.2.1 | Tomato | plastid | 85.03 | 83.53 |
| CDY32651 | Canola | nucleus | 85.03 | 83.53 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 83.23 | 82.74 |
| CDY33025 | Canola | cytosol | 81.44 | 82.42 |
| Zm00001d042929_P001 | Maize | cytosol, nucleus, plastid | 82.63 | 81.66 |
| Zm00001d038376_P001 | Maize | extracellular | 82.63 | 81.66 |
| Os05t0460200-01 | Rice | cytosol, nucleus, plastid | 82.63 | 81.66 |
| TraesCS1A01G285200.1 | Wheat | cytosol, nucleus, plastid | 82.63 | 81.66 |
| TraesCS1D01G284200.1 | Wheat | cytosol, nucleus, plastid | 82.63 | 81.66 |
| TraesCS3D01G351600.1 | Wheat | cytosol, nucleus, plastid | 82.63 | 81.66 |
| TraesCS3B01G390400.1 | Wheat | cytosol, nucleus, plastid | 82.63 | 81.66 |
| TraesCS3A01G357700.1 | Wheat | cytosol, nucleus, plastid | 82.63 | 81.66 |
| EES03856 | Sorghum | cytosol, nucleus, plastid | 82.04 | 81.07 |
| HORVU1Hr1G072200.2 | Barley | cytosol | 82.04 | 81.07 |
| Zm00001d012421_P003 | Maize | cytosol, nucleus, plastid | 82.04 | 81.07 |
| AT3G55380.2 | Thale cress | nucleus | 93.41 | 77.61 |
| CDX80292 | Canola | cytosol | 81.44 | 75.98 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 59.28 | 72.79 |
| KXG22164 | Sorghum | cytosol, nucleus, plastid | 74.85 | 72.67 |
| TraesCS1B01G294400.2 | Wheat | plastid | 82.63 | 69.0 |
| Zm00001d010534_P001 | Maize | cytosol | 81.44 | 57.38 |
| GSMUA_Achr5P08330_001 | Banana | extracellular, golgi, vacuole | 31.14 | 54.74 |
| HORVU3Hr1G086540.2 | Barley | endoplasmic reticulum, golgi, plastid | 82.63 | 54.55 |
| Zm00001d040631_P001 | Maize | cytosol | 56.89 | 41.85 |
| CDY45063 | Canola | cytosol | 29.34 | 38.28 |
| CDX73361 | Canola | extracellular | 20.36 | 36.96 |
| CDX67711 | Canola | cytosol | 32.93 | 34.38 |
| CDX98253 | Canola | cytosol | 32.93 | 34.38 |
| CDX88967 | Canola | cytosol | 32.93 | 34.38 |
| CDY70581 | Canola | cytosol | 32.93 | 34.38 |
| CDY47661 | Canola | cytosol | 32.34 | 33.75 |
| CDX71988 | Canola | nucleus | 31.74 | 33.12 |
| CDY29588 | Canola | cytosol, plastid | 34.13 | 32.57 |
| CDY62105 | Canola | cytosol, plastid | 34.13 | 32.57 |
| CDY42228 | Canola | plastid | 34.73 | 32.04 |
| CDY33445 | Canola | nucleus | 34.13 | 31.49 |
| CDY37132 | Canola | cytosol, plastid | 34.13 | 31.49 |
| CDY22799 | Canola | cytosol, plastid | 34.13 | 31.49 |
| CDY24563 | Canola | cytosol, nucleus, peroxisome, plastid | 34.13 | 31.32 |
| CDY25375 | Canola | plastid | 34.13 | 31.32 |
| CDY66302 | Canola | cytosol | 29.34 | 30.62 |
| CDX93982 | Canola | cytosol | 29.34 | 30.62 |
| CDY03608 | Canola | nucleus | 20.96 | 29.66 |
| Zm00001d008383_P001 | Maize | plastid | 27.54 | 20.0 |
| Zm00001d009034_P002 | Maize | nucleus | 41.92 | 18.09 |
| Zm00001d029705_P032 | Maize | plasma membrane | 29.34 | 9.01 |
| Zm00001d005779_P153 | Maize | plasma membrane | 20.36 | 5.67 |
Protein Annotations
| MapMan:19.2.2.1.6.1.1 | MapMan:19.2.4.1.2 | Gene3D:3.10.110.10 | GO:A0A078JCK0 | UniProt:A0A078JCK0 | EnsemblPlants:CDY53695 |
| ProteinID:CDY53695 | ProteinID:CDY53695.1 | ProteinID:CDY62383.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00011251001 | InterPro:IPR000608 | InterPro:IPR016135 |
| PFAM:PF00179 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR24067 | PANTHER:PTHR24067:SF174 | MetaCyc:PWY-7511 |
| SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniPathway:UPA00143 |
| UniParc:UPI00025414AF | SEG:seg | : | : | : | : |
Description
BnaA07g37890DBnaA07g37890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCK0]
Coordinates
chrLK033228:-:65594..66459
Molecular Weight (calculated)
18744.2 Da
IEP (calculated)
4.998
GRAVY (calculated)
-0.441
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKNQASLLL QKQLKDLCKH PVDGFSAGLV DENNVFQWSV SIMGPPDTLY EGGFFNAIMT FPEDYPNSPP TVKFTSEMWH PNVYSDGKVC ISILHPPGDD
101: PNGYELASER WTPVHTVESI VLSIISMLSG PNDESPANVE AAKEWRDNRA EFRKKVSRCV RKSQEML
101: PNGYELASER WTPVHTVESI VLSIISMLSG PNDESPANVE AAKEWRDNRA EFRKKVSRCV RKSQEML
001: MANNQASLLL QKQLKDLCKK PVDGFSAGLV DEKNVFQWSV SIMGPPDTLY EGGFFNAIMS FPENYPVSPP TVTFTSEMWH PNVYSDGKVC ISILHPPGDD
101: PHGYELASER WTPVHTVESI VLSIISMLSG PNDESPANVE AAKEWRDNRA EFRKKVSRCV RRSQEML
101: PHGYELASER WTPVHTVESI VLSIISMLSG PNDESPANVE AAKEWRDNRA EFRKKVSRCV RRSQEML
Arabidopsis Description
UBC14Ubiquitin-conjugating enzyme 14 [Source:UniProtKB/TrEMBL;Acc:F4IWU7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.