Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- mitochondrion 4
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03856 | Sorghum | cytosol, nucleus, plastid | 90.48 | 89.94 |
| Zm00001d012421_P003 | Maize | cytosol, nucleus, plastid | 90.48 | 89.94 |
| Zm00001d038376_P001 | Maize | extracellular | 89.88 | 89.35 |
| VIT_06s0004g04430.t01 | Wine grape | cytosol, nucleus, plastid | 89.88 | 88.82 |
| Os01t0839700-01 | Rice | cytosol, nucleus, plastid | 89.29 | 88.76 |
| Os05t0460200-01 | Rice | cytosol, nucleus, plastid | 89.29 | 88.76 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 88.69 | 88.69 |
| TraesCS3D01G351600.1 | Wheat | cytosol, nucleus, plastid | 88.69 | 88.17 |
| TraesCS3B01G390400.1 | Wheat | cytosol, nucleus, plastid | 88.69 | 88.17 |
| TraesCS3A01G357700.1 | Wheat | cytosol, nucleus, plastid | 88.69 | 88.17 |
| VIT_13s0019g00910.t01 | Wine grape | plastid | 87.5 | 87.5 |
| Zm00001d042929_P001 | Maize | cytosol, nucleus, plastid | 87.5 | 86.98 |
| TraesCS1D01G284200.1 | Wheat | cytosol, nucleus, plastid | 86.31 | 85.8 |
| TraesCS1A01G285200.1 | Wheat | cytosol, nucleus, plastid | 86.31 | 85.8 |
| HORVU1Hr1G072200.2 | Barley | cytosol | 85.71 | 85.21 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 84.52 | 84.52 |
| KXG22164 | Sorghum | cytosol, nucleus, plastid | 80.36 | 78.49 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 63.1 | 77.94 |
| TraesCS1B01G294400.2 | Wheat | plastid | 86.31 | 72.5 |
| Zm00001d010534_P001 | Maize | cytosol | 89.29 | 63.29 |
| HORVU3Hr1G086540.2 | Barley | endoplasmic reticulum, golgi, plastid | 88.69 | 58.89 |
| GSMUA_Achr5P08330_001 | Banana | extracellular, golgi, vacuole | 32.74 | 57.89 |
| Zm00001d040631_P001 | Maize | cytosol | 61.31 | 45.37 |
| VIT_07s0031g00160.t01 | Wine grape | nucleus | 30.36 | 31.48 |
| VIT_06s0061g00070.t01 | Wine grape | cytosol | 30.95 | 29.38 |
| VIT_13s0019g04090.t01 | Wine grape | cytosol | 30.36 | 26.84 |
| VIT_18s0001g10100.t01 | Wine grape | nucleus | 27.38 | 23.59 |
| Zm00001d009034_P002 | Maize | nucleus | 47.02 | 20.41 |
| Zm00001d008383_P001 | Maize | plastid | 26.19 | 19.13 |
| Zm00001d029705_P032 | Maize | plasma membrane | 30.36 | 9.38 |
| Zm00001d005779_P153 | Maize | plasma membrane | 21.43 | 6.0 |
Protein Annotations
| EntrezGene:100264959 | wikigene:100264959 | MapMan:19.2.2.1.6.1.1 | MapMan:19.2.4.1.2 | Gene3D:3.10.110.10 | ProteinID:CBI30575 |
| ProteinID:CBI30575.3 | UniProt:D7THQ9 | EMBL:FN595991 | GO:GO:0000166 | GO:GO:0000209 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031625 | GO:GO:0061630 |
| InterPro:IPR000608 | InterPro:IPR016135 | EntrezGene:LOC100264959 | wikigene:LOC100264959 | PFAM:PF00179 | ScanProsite:PS00183 |
| PFscan:PS50127 | PANTHER:PTHR24067 | PANTHER:PTHR24067:SF237 | SMART:SM00212 | SUPFAM:SSF54495 | TIGR:TC51950 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI00015C9EA6 | ArrayExpress:VIT_08s0007g00120 | EnsemblPlantsGene:VIT_08s0007g00120 |
| EnsemblPlants:VIT_08s0007g00120.t01 | RefSeq:XP_002263503 | RefSeq:XP_002263503.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr8:-:14510398..14517453
Molecular Weight (calculated)
18889.4 Da
IEP (calculated)
5.005
GRAVY (calculated)
-0.401
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTTQACLL LQKQLRDLCK RPVDGFSAGL VDESNVFEWS VSIIGPPDTL YDGGFFNAIM SFPPNYPNSP PSVRFTSDMW HPNVYPDGRV CISILHPPGE
101: DPNGYELASE RWTPVHTVES IVLSIISMLS SPNDESPANI EAAKEWREKR DEFKKKVSRC VRKSQEML
101: DPNGYELASE RWTPVHTVES IVLSIISMLS SPNDESPANI EAAKEWREKR DEFKKKVSRC VRKSQEML
001: MNSQACLLLQ KQLKDLCKHP VDGFSAGLVD EKNIFEWSVT IIGPPDTLYE GGFFYAIMSF PQNYPNSPPT VRFTSDIWHP NVYPDGRVCI SILHPPGDDP
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWREKRDE FKKKVSRCVR KSQEMF
101: SGYELASERW TPVHTVESIM LSIISMLSGP NDESPANVEA AKEWREKRDE FKKKVSRCVR KSQEMF
Arabidopsis Description
UBC13UBC13 [Source:UniProtKB/TrEMBL;Acc:A0A178V960]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.