Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG91877 | Soybean | cytosol, plastid | 80.0 | 81.72 |
| KRH34891 | Soybean | nucleus, plastid | 80.0 | 81.72 |
| GSMUA_Achr10P... | Banana | cytosol | 55.26 | 80.15 |
| GSMUA_Achr7P22730_001 | Banana | cytosol | 73.16 | 75.96 |
| VIT_06s0061g00070.t01 | Wine grape | cytosol | 62.11 | 66.67 |
| VIT_13s0019g00910.t01 | Wine grape | plastid | 28.95 | 32.74 |
| VIT_06s0004g04430.t01 | Wine grape | cytosol, nucleus, plastid | 28.42 | 31.76 |
| VIT_07s0031g00160.t01 | Wine grape | nucleus | 26.84 | 31.48 |
| VIT_08s0007g00120.t01 | Wine grape | mitochondrion | 26.84 | 30.36 |
| VIT_18s0001g10100.t01 | Wine grape | nucleus | 26.32 | 25.64 |
Protein Annotations
| EntrezGene:100253010 | wikigene:100253010 | MapMan:13.3.4.1.2 | Gene3D:3.10.110.10 | UniProt:A5AE59 | EMBL:AM424341 |
| ProteinID:CAN75562 | ProteinID:CAN75562.1 | ProteinID:CBI31480 | ProteinID:CBI31480.3 | EMBL:FN595998 | GO:GO:0000166 |
| GO:GO:0000209 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0030071 | GO:GO:0031145 | GO:GO:0031625 | GO:GO:0061630 |
| InterPro:IPR000608 | InterPro:IPR016135 | EntrezGene:LOC100253010 | wikigene:LOC100253010 | PFAM:PF00179 | ScanProsite:PS00183 |
| PFscan:PS50127 | PANTHER:PTHR44189 | SMART:SM00212 | SUPFAM:SSF54495 | TIGR:TC54831 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000151E5BC | ArrayExpress:VIT_13s0019g04090 | EnsemblPlantsGene:VIT_13s0019g04090 | EnsemblPlants:VIT_13s0019g04090.t01 |
| unigene:Vvi.623 | RefSeq:XP_002275915 | RefSeq:XP_002275915.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr13:+:5369917..5375832
Molecular Weight (calculated)
21274.2 Da
IEP (calculated)
5.207
GRAVY (calculated)
-0.395
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVRPNPVDD NSSIPQQHQH HAHAAPSKQL KAAPNPVDTS SVSQRLQKEL MALMMSGGDL GVSAFPESES IFTWIGTIMG GNGTVYEGLS YKLSLRFPLD
101: YPFKPPQVKF ETMCFHPNID QFGNICLDIL QDKWSSAYDC KTVLLSIQSL LGEPNIESPL NSYAASLWNN QEDYRKMVHK QYFAGEAFES
101: YPFKPPQVKF ETMCFHPNID QFGNICLDIL QDKWSSAYDC KTVLLSIQSL LGEPNIESPL NSYAASLWNN QEDYRKMVHK QYFAGEAFES
001: MATVNGYTGN TPAATTPAAT GSKQSAPPTK TVDSHSVLKR LQSELMGLMM GADPGISAFP EEDNIFCWKG TITGSKDTVF EGTEYRLSLT FSNDYPFKSP
101: KVKFETCCFH PNVDLYGNIC LDILQDKWSS AYDVRTILLS IQSLLGEPNI SSPLNNQAAQ LWSNQEEYRK MVEKLYKPLN A
101: KVKFETCCFH PNVDLYGNIC LDILQDKWSS AYDVRTILLS IQSLLGEPNI SSPLNNQAAQ LWSNQEEYRK MVEKLYKPLN A
Arabidopsis Description
UBC19UBC19 [Source:UniProtKB/TrEMBL;Acc:A0A178V7W3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.