Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P22730_001 | Banana | cytosol | 91.6 | 65.57 |
| KRG91877 | Soybean | cytosol, plastid | 79.39 | 55.91 |
| KRH34891 | Soybean | nucleus, plastid | 79.39 | 55.91 |
| VIT_13s0019g04090.t01 | Wine grape | cytosol | 80.15 | 55.26 |
| GSMUA_Achr3P08740_001 | Banana | cytosol | 73.28 | 52.75 |
| GSMUA_Achr9P17810_001 | Banana | cytosol | 70.99 | 50.27 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 38.17 | 29.76 |
| GSMUA_Achr5P08330_001 | Banana | extracellular, golgi, vacuole | 21.37 | 29.47 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 36.64 | 28.57 |
| GSMUA_Achr1P03640_001 | Banana | nucleus | 34.35 | 28.12 |
| GSMUA_Achr3P05370_001 | Banana | cytosol | 33.59 | 27.5 |
| GSMUA_Achr9P14150_001 | Banana | nucleus | 33.59 | 27.5 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.59 | 27.5 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 22.9 | 22.06 |
Protein Annotations
| MapMan:13.3.4.1.2 | Gene3D:3.10.110.10 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0016740 | EnsemblPlantsGene:GSMUA_Achr10G29420_001 | EnsemblPlants:GSMUA_Achr10P29420_001 | EnsemblPlants:GSMUA_Achr10T29420_001 | InterPro:IPR000608 |
| InterPro:IPR016135 | UniProt:M0RMG6 | PFAM:PF00179 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR44189 |
| SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000295C8FE |
Description
Ubiquitin-conjugating enzyme E2 C [Source:GMGC_GENE;Acc:GSMUA_Achr10G29420_001]
Coordinates
chr10:-:31970581..31971794
Molecular Weight (calculated)
14765.6 Da
IEP (calculated)
4.584
GRAVY (calculated)
-0.233
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGDTGVSAF PEGENIFSWI GTIEGSKGTP YKGLLYKLSL SFPLVYPFKP PLVKFETPCF HPNIDQCGNI CLDILQDMWS SAYDCRTILL SIQSLLGEPN
101: NESPLNSYAA TLWSNQEDYK KMVHKQYMDN I
101: NESPLNSYAA TLWSNQEDYK KMVHKQYMDN I
001: MATVNGYTGN TPAATTPAAT GSKQSAPPTK TVDSHSVLKR LQSELMGLMM GADPGISAFP EEDNIFCWKG TITGSKDTVF EGTEYRLSLT FSNDYPFKSP
101: KVKFETCCFH PNVDLYGNIC LDILQDKWSS AYDVRTILLS IQSLLGEPNI SSPLNNQAAQ LWSNQEEYRK MVEKLYKPLN A
101: KVKFETCCFH PNVDLYGNIC LDILQDKWSS AYDVRTILLS IQSLLGEPNI SSPLNNQAAQ LWSNQEEYRK MVEKLYKPLN A
Arabidopsis Description
UBC19UBC19 [Source:UniProtKB/TrEMBL;Acc:A0A178V7W3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.