Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P17810_001 | Banana | cytosol | 87.91 | 86.49 |
| VIT_06s0061g00070.t01 | Wine grape | cytosol | 76.37 | 78.53 |
| CDY45063 | Canola | cytosol | 54.95 | 78.12 |
| Bra030487.1-P | Field mustard | cytosol, plastid | 73.08 | 76.44 |
| CDY62105 | Canola | cytosol, plastid | 73.08 | 76.0 |
| CDY29588 | Canola | cytosol, plastid | 73.08 | 76.0 |
| PGSC0003DMT400080256 | Potato | cytosol, plastid | 74.18 | 75.84 |
| Solyc11g065190.1.1 | Tomato | plastid | 74.73 | 75.14 |
| AT1G50490.1 | Thale cress | plastid | 74.18 | 75.0 |
| Bra018852.1-P | Field mustard | cytosol, plastid | 73.63 | 74.03 |
| CDY22799 | Canola | cytosol, plastid | 73.63 | 74.03 |
| CDY37132 | Canola | cytosol, plastid | 73.63 | 74.03 |
| GSMUA_Achr10P... | Banana | cytosol | 52.75 | 73.28 |
| CDY24563 | Canola | cytosol, nucleus, peroxisome, plastid | 73.08 | 73.08 |
| CDY25375 | Canola | plastid | 73.08 | 73.08 |
| CDY33445 | Canola | nucleus | 72.53 | 72.93 |
| Bra035819.1-P | Field mustard | cytosol, plastid | 72.53 | 72.93 |
| KRH24100 | Soybean | cytosol, plastid | 71.98 | 72.78 |
| AT3G20060.1 | Thale cress | plastid | 71.98 | 72.38 |
| CDY42228 | Canola | plastid | 71.98 | 72.38 |
| Bra038253.1-P | Field mustard | nucleus | 71.98 | 72.38 |
| TraesCS3A01G186500.1 | Wheat | cytosol, plastid | 73.63 | 72.04 |
| Zm00001d008260_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 70.88 | 70.49 |
| KXG32249 | Sorghum | plastid | 70.88 | 70.11 |
| Os01t0273100-01 | Rice | plastid | 71.43 | 68.06 |
| OQU80782 | Sorghum | nucleus, plastid | 68.13 | 65.96 |
| HORVU3Hr1G038430.3 | Barley | nucleus, plastid | 67.03 | 64.55 |
| TraesCS3D01G190400.2 | Wheat | nucleus, plastid | 67.03 | 63.21 |
| KRH29075 | Soybean | cytosol, golgi, peroxisome, plastid | 61.54 | 61.88 |
| Bra014255.1-P | Field mustard | cytosol | 55.49 | 61.59 |
| TraesCS3B01G216000.2 | Wheat | plastid | 73.63 | 61.19 |
| GSMUA_Achr7P22730_001 | Banana | cytosol | 60.99 | 60.66 |
| CDY03608 | Canola | nucleus | 34.07 | 52.54 |
| Zm00001d008261_P003 | Maize | nucleus | 57.69 | 41.34 |
| GSMUA_Achr1P03640_001 | Banana | nucleus | 30.77 | 35.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.22 | 34.38 |
| GSMUA_Achr3P05370_001 | Banana | cytosol | 30.22 | 34.38 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 31.32 | 33.93 |
| GSMUA_Achr6P34220_001 | Banana | plastid | 30.77 | 33.33 |
| GSMUA_Achr5P08330_001 | Banana | extracellular, golgi, vacuole | 17.03 | 32.63 |
| GSMUA_Achr9P14150_001 | Banana | nucleus | 28.57 | 32.5 |
| GSMUA_Achr5P08370_001 | Banana | cytosol | 20.33 | 27.21 |
Protein Annotations
| MapMan:13.3.4.1.2 | Gene3D:3.10.110.10 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0016740 | EnsemblPlantsGene:GSMUA_Achr3G08740_001 | EnsemblPlants:GSMUA_Achr3P08740_001 | EnsemblPlants:GSMUA_Achr3T08740_001 | InterPro:IPR000608 |
| InterPro:IPR016135 | UniProt:M0SCZ1 | PFAM:PF00179 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR44189 |
| SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI00029557F4 |
| SEG:seg | : | : | : | : | : |
Description
Ubiquitin-conjugating enzyme E2 19 [Source:GMGC_GENE;Acc:GSMUA_Achr3G08740_001]
Coordinates
chr3:-:6320806..6322445
Molecular Weight (calculated)
20134.0 Da
IEP (calculated)
4.667
GRAVY (calculated)
-0.282
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTTENQDVQ DNIPPAADTA PSAAKHTAAA AKGLDGQSVL KSRLQSELMS LMMCGDPGIS AFPEGDNIFC WKGTITGSKE TVYEGMIYKL SFSFPTDYPF
101: KPPKVKFETV CFHPNVDIYG NICLDILQDK WSSAYDVRTI LLSIQSLLGE PNNESPLNTQ AAALWVNQEE FRKMVEKLYK PA
101: KPPKVKFETV CFHPNVDIYG NICLDILQDK WSSAYDVRTI LLSIQSLLGE PNNESPLNTQ AAALWVNQEE FRKMVEKLYK PA
001: MATVNGYTGN TPAATTPAAT GSKQSAPPTK TVDSHSVLKR LQSELMGLMM GADPGISAFP EEDNIFCWKG TITGSKDTVF EGTEYRLSLT FSNDYPFKSP
101: KVKFETCCFH PNVDLYGNIC LDILQDKWSS AYDVRTILLS IQSLLGEPNI SSPLNNQAAQ LWSNQEEYRK MVEKLYKPLN A
101: KVKFETCCFH PNVDLYGNIC LDILQDKWSS AYDVRTILLS IQSLLGEPNI SSPLNNQAAQ LWSNQEEYRK MVEKLYKPLN A
Arabidopsis Description
UBC19UBC19 [Source:UniProtKB/TrEMBL;Acc:A0A178V7W3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.