Factsheet for Os03t0606100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os01t0917900-01
Os02t0168000-02
Os02t0742200-01
Os03t0319300-01
Os05t0491000-01
Os05t0491100-01
Os06t0234200-03
Os07t0687200-02
Os09t0505000-00
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G27690.1	Os01t0267900-01	AT2G41100.1	17360592
AT1G27690.1	Os01t0279300-01	AT2G41100.1	17360592
AT1G27690.1	Os01t0810300-01	AT2G41100.1	17360592
AT1G27690.1	Os03t0319300-01	AT2G41100.1	17360592
AT1G27690.1	Os05t0491000-01	AT2G41100.1	17360592
AT1G27690.1	Os05t0491100-01	AT2G41100.1	17360592
AT1G27690.1	Os07t0687200-02	AT2G41100.1	17360592
AT1G27690.1	Os12t0603800-00	AT2G41100.1	17360592
AT1G27690.1	Os01t0917900-01	AT3G07120.1	21798944
AT1G27690.1	Os09t0505000-00	AT3G07120.1	21798944
AT1G49840.1	Os02t0168000-02	AT1G21840.1	21798944
AT3G19540.1	Os02t0742200-01	AT5G62880.1	21798944
AT3G19540.1	Os06t0234200-03	AT5G62880.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0581300-01	Rice	cytosol	31.36	87.34
TraesCS4D01G076200.1	Wheat	cytosol, mitochondrion	87.27	84.03
TraesCS4A01G237300.1	Wheat	cytosol, mitochondrion	87.05	83.81
TraesCS4B01G077800.1	Wheat	cytosol	86.36	83.15
EER91248	Sorghum	cytosol	81.14	76.45
Zm00001d013746_P001	Maize	cytosol	78.64	74.73
HORVU4Hr1G013190.8	Barley	mitochondrion	80.0	69.7
GSMUA_Achr7P00620_001	Banana	mitochondrion	62.5	67.57
VIT_03s0091g00410.t01	Wine grape	plastid	71.82	66.53
KRG91072	Soybean	plastid	69.55	66.09
KRH35700	Soybean	plastid	69.32	66.02
PGSC0003DMT400066530	Potato	plastid	70.0	65.53
Solyc01g107350.2.1	Tomato	plastid	69.55	65.11
CDY50147	Canola	mitochondrion	63.64	63.78
CDX95439	Canola	mitochondrion	62.73	63.45
VIT_18s0001g09450.t01	Wine grape	plastid	67.27	63.11
PGSC0003DMT400055468	Potato	plastid	66.14	61.91
CDY67693	Canola	mitochondrion	63.86	61.89
CDY46168	Canola	mitochondrion	63.86	61.62
Bra038214.1-P	Field mustard	mitochondrion, plastid	63.18	60.57
Bra022430.1-P	Field mustard	mitochondrion, plastid	63.86	59.91
CDY16530	Canola	plastid	61.14	59.51
KRH15430	Soybean	plastid	63.86	59.41
AT3G19540.1	Thale cress	plastid	65.23	59.18
CDY32838	Canola	plastid	61.14	59.12
Os07t0591100-01	Rice	nucleus	69.55	59.07
KRH05611	Soybean	plastid	63.86	59.03
AT1G27690.1	Thale cress	plastid	55.45	56.35
Bra014219.1-P	Field mustard	plastid	61.82	55.74
AT1G49840.1	Thale cress	plastid	61.82	55.06
CDY03939	Canola	cytosol	14.55	54.24
Solyc04g078190.2.1	Tomato	nucleus, plastid	34.09	51.19
CDY67976	Canola	mitochondrion, plastid	55.0	47.73
CDX90103	Canola	mitochondrion, plastid	54.77	47.53
Bra010924.1-P	Field mustard	mitochondrion, plastid	56.59	46.63
Os03t0167400-00	Rice	cytosol	37.73	45.36
Os03t0267500-01	Rice	plasma membrane	44.09	43.99
Os10t0411100-00	Rice	cytosol, peroxisome, plasma membrane	38.18	37.5
Os05t0252100-01	Rice	cytosol	39.09	35.25

Protein Annotations

EnsemblPlants:Os03t0606100-01	EnsemblPlantsGene:Os03g0606100	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF620
PANTHER:PTHR31300	PANTHER:PTHR31300:SF20	PFAM:PF04788	ProteinID:BAS85227.1	SEG:seg	UniParc:UPI000393862A
UniProt:A0A0P0W0P9	MapMan:27.4.5.3	:	:	:	:

Description

Similar to predicted protein. (Os03t0606100-01)

Coordinates

chr3:-:22744360..22746914

Molecular Weight (calculated)

46417.6 Da

IEP (calculated)

7.918

GRAVY (calculated)

-0.202

Length

440 amino acids

Sequence
(BLAST)

001: MSGGGGGGGE MLAPLMEGPD PESGDGEGGG GGGGGGGGGG GGGRGARGRR GEGWGQWVRG QLSRTPSSVA AAAAGAGAAR NDLRLLLGVM GAPLAPVHVS
101: AAEPLPHLSI KDTPIETSSA QYILQQYLAA SGGQKLLASV RNAYTMGKVR MVATEFETAG RLVKNRNAAR CAEPGRFVLW QMAPEMWYIE LAVGGSKVHA
201: GCNGKLVWRH TPWLGAHAAK GPVRPLRRAL QGLDPLTTAS MFAGARCIGE RKVNGEDCFI LKLCTEPETL KARSEGLAEI IRHVMFGYFS QRTGLLVHIE
301: DSHLTRIQST TGGDAVYWET TINSFIEDYR PVEGIMIAHS GRSAVTLFRF GEVAMSHTKT RMEEAWSIEE VAFNVPGLSM DCFIPPTDIK SGSISETVEL
401: SHGEKSKVGP PPGHRAKVAA LEKAVDGKVA WSGTILEDHN

Best Arabidopsis Sequence Match ( AT3G19540.1 )
(BLAST)

001: MEKKQGFFSA LRHEVVRGLS PSRSRARSRS VSPARSSSPM SALTWGRKNL TGGGGGGGGG GYYLAQPEQL IGRSGSLRPV MEGPDPDEGG GGGNIGESKR
101: LGSGLGHWVK GQLSRAPSVA ATAAYRRNDL RLLLGVMGAP LAPIHVSSSD PLPHLSIKNT PIETSSAQYI LQQYTAASGG QKLQNSIKNA YAMGKLKMIT
201: SELETATRTV RNRNPSKAET GGFVLWQMNP DMWYVELAVG GSKVRAGCNG KLVWRHTPWL GSHTAKGPVR PLRRGLQGLD PRTTAAMFAE AKCIGEKKVN
301: GEDCFILKLC TDPETLKARS EGPAEIIRHV LFGYFSQKTG LLVHIEDSHL TRIQSNGGET VFWETTYNSS LDDYRQVEGI MIAHSGHSVV TLFRFGEVAT
401: SHTRTKMEES WTIEEVAFNV PGLSLDCFIP PADLKTGSLT ESCEYPQEER GKNNTLALSA AHRAKVAALE NGSLEDHRPV WHTDV

Arabidopsis Description

AT3g19540/T31J18_4 [Source:UniProtKB/TrEMBL;Acc:Q9LH41]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.